RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 EFNB1P98172 346 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 TRIP10Q15642 601 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 VWA1Q6PCB0 445 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 MYO7BQ6PIF6 2116 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 TFAP2EQ6VUC0 442 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 ZBTB49Q6ZSB9 765 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 BTLAQ7Z6A9 289 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 GPAT4Q86UL3 456 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 FJX1Q86VR8 437 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 ARIH2OSQ8N7S6 290 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 RELL2Q8NC24 303 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 OR4Q3Q8NH05 313 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 PRR7Q8TB68 274 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 RND1Q92730 232 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 EME1Q96AY2 570 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 BOD1Q96IK1 185 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 RDH12Q96NR8 316 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 SNX18Q96RF0 628 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 KATNB1Q9BVA0 655 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 LINC00470Q9BZP3 86 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 ZNF556Q9HAH1 456 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 KRT84Q9NSB2 600 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 MED29Q9NX70 200 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 SH3BGRL2Q9UJC5 107 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 ZNF346Q9UL40 294 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 CLEC4AQ9UMR7 237 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 SLC5A6Q9Y289 635 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 ADAM18Q9Y3Q7 739 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 SLC35F4A4IF30 521 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 ZAR1LA6NP61 321 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 C11orf98E9PRG8 122 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 H0YJX3 145 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 RPL36A-HNRNPH2H7BZ11 118 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 OR6A2O95222 327 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 AHCYP23526 432 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 IGFBP5P24593 272 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 SDHAP31040 664 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 OPRM1P35372 400 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 GIPRP48546 466 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 RPL27P61353 136 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 RUNX1T1Q06455 604 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 MESTQ5EB52 335 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 FAM205BPQ63HN1 556 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 LPCAT4Q643R3 524 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 GPR139Q6DWJ6 353 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 IGFN1Q86VF2 1251 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 TMEM54Q969K7 222 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 SDCCAG3Q96C92 435 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 GRIP2Q9C0E4 1043 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 PARPBPQ9NWS1 579 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 MALT1Q9UDY8 824 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 IL20RAQ9UHF4 553 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 EMC9Q9Y3B6 208 aa13.1□□□□□ -0.31
SNRPA1-207ENST00000559309 UNC79Q9P2D8 2635 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 AHCYL1O43865 530 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 SOX14O95416 240 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 SELENOPP49908 381 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 CLDN17P56750 224 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 NPRL3Q12980 569 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 PTGES3Q15185 160 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 CDSNQ15517 529 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 STK11Q15831 433 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 DOPEY1Q5JWR5 2465 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 TMEM201Q5SNT2 666 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 SLX4IPQ5VYV7 408 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 ACSM5Q6NUN0 579 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 LURAP1LQ8IV03 231 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 MCEMP1Q8IX19 187 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 C20orf196Q8IYI0 205 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 LILRB4Q8NHJ6 448 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 ITLN2Q8WWU7 325 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 ZNF775Q96BV0 537 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 SLC25A44Q96H78 314 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 Q96M85 177 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 MBOAT4Q96T53 435 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 PIGMQ9H3S5 423 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 VSX1Q9NZR4 365 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 ENOPH1Q9UHY7 261 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 BAIAP2Q9UQB8 552 aa13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 NOSIPQ9Y314 301 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-207ENST00000559309 PCNX1Q96RV3 2341 aa13.08□□□□□ -0.31
SNRPA1-207ENST00000559309 OR6C65A6NJZ3 312 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 A8MXE2 369 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 MSTNO14793 375 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 MRPL33O75394 65 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 TRMUO75648 421 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 PPP1R3DO95685 299 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 BCL10O95999 233 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 COX5AP20674 150 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 CHRNB4P30926 498 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 GRK5P34947 590 aa13.08□□□□□ -0.32
SNRPA1-207ENST00000559309 POLR2IP36954 125 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms