RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 PAQR5Q9NXK6 330 aaPredicted RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SEMA5BQ9P283 1151 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 LAMP5Q9UJQ1 280 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 RNF215Q9Y6U7 377 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 MAU2Q9Y6X3 613 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 IGHV1OR21-1A0A087WYE8 117 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 A0A1B0GVT2 93 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 A0A1B0GX78 115 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TMEM212A6NML5 194 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 IFITM5A6NNB3 132 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 H3BMH7 237 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 HCRTR2O43614 444 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SCO2O43819 266 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TSPAN2O60636 221 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ICOSLGO75144 302 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SERPINI2O75830 405 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 PIAS2O75928 621 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 CNOT4O95628 575 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 LDOC1O95751 146 aaPredicted RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SNRPBP14678 240 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 PRKCAP17252 672 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 MNDAP41218 407 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 GZMKP49863 264 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 POLR2HP52434 150 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 HCCSP53701 268 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 PNLIPRP2P54317 469 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 EGR4Q05215 589 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 GXYLT1Q4G148 440 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ARHGAP40Q5TG30 622 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 EEF1A1P5Q5VTE0 462 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 CD276Q5ZPR3 534 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TIGD4Q8IY51 512 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 Q8N9G6 341 aaPredicted RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 OR1N1Q8NGS0 311 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 OR5H6Q8NGV6 325 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 OR5AK2Q8NH90 309 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 LILRB4Q8NHJ6 448 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ZPLD1Q8TCW7 415 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SMAP2Q8WU79 429 aaPredicted RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 DEDD2Q8WXF8 326 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ASB17Q8WXJ9 295 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TSLPQ969D9 159 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 HYLS1Q96M11 299 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 MOGAT1Q96PD6 335 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 LMF1Q96S06 567 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ABHD1Q96SE0 405 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 INTS14Q96SY0 518 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 ADOQ96SZ5 270 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 PDCD1LG2Q9BQ51 273 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 WWTR1Q9GZV5 400 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 EMC7Q9NPA0 242 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 MCUBQ9NWR8 336 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 SRPK3Q9UPE1 567 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 AK6Q9Y3D8 172 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 PCDHGA9Q9Y5G4 932 aaKnown RBP6.6□□□□□ -1.35
VPS13C-206ENST00000558338 V9GY05 133 aa6.6□□□□□ -1.35
VPS13C-206ENST00000558338 TRBV5-5A0A0J9YX44 114 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 FAM181BA6NEQ2 426 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 OR2W5A6NFC9 320 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 A8MUA0 341 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 GABARAPH6UMI1 98 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.35
VPS13C-206ENST00000558338 OIP5O43482 229 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 LANCL1O43813 399 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 PRAF2O60831 178 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF254O75437 659 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 IGHMP01871 453 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 BGLAPP02818 100 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 TCRBP04435 133 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 CELA3AP09093 270 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 GLB1P16278 677 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 TCEA1P23193 301 aaKnown RBP6.59□□□□□ -1.35
VPS13C-206ENST00000558338 ITPKBP27987 946 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 BTCP35070 178 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 PSMB10P40306 273 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 OR1D4P47884 311 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 P2RX1P51575 399 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF117Q03924 483 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 FOXC1Q12948 553 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 MYO9BQ13459 2157 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 UBXN2BQ14CS0 331 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 SGCBQ16585 318 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 SLC36A2Q495M3 483 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 MESTQ5EB52 335 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 CBLN3Q6UW01 205 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 LYPD4Q6UWN0 246 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 BTN2A1Q7KYR7 527 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 FGD2Q7Z6J4 655 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 LUZP2Q86TE4 346 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 GLCCI1Q86VQ1 547 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF227Q86WZ6 799 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 GHDCQ8N2G8 530 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 OR6S1Q8NH40 331 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF417Q8TAU3 575 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 STK35Q8TDR2 534 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 NSMAFQ92636 917 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 OMA1Q96E52 524 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 SCMH1Q96GD3 660 aa6.59□□□□□ -1.35
VPS13C-206ENST00000558338 SLC41A2Q96JW4 573 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms