RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 A0A1B0GWA3 101 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 ISPDA4D126 451 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 TRAPPC13A5PLN9 417 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 FAM220BPB1ANY3 271 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 CLOCKO15516 846 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 FRS3O43559 492 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 CHP2O43745 196 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 BCAS1O75363 584 aaPredicted RBP7.67□□□□□ -1.18
USP3-208ENST00000558285 SLC43A1O75387 559 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 LGI1O95970 557 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 BCL10O95999 233 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 THRBP10828 461 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 ZNF26P17031 533 aaPredicted RBP7.67□□□□□ -1.18
USP3-208ENST00000558285 PCBP3P57721 371 aaKnown RBP7.67□□□□□ -1.18
USP3-208ENST00000558285 SNTB1Q13884 538 aaKnown RBP7.67□□□□□ -1.18
USP3-208ENST00000558285 FLOT2Q14254 428 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 PPA1Q15181 289 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 POU4F3Q15319 338 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 OR1Q1Q15612 314 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 MAPK11Q15759 364 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 STK11Q15831 433 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 HMBOX1Q6NT76 420 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 TMEM108Q6UXF1 575 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 HACD2Q6Y1H2 254 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 H1FNTQ75WM6 255 aaPredicted RBP7.67□□□□□ -1.18
USP3-208ENST00000558285 NUFIP2Q7Z417 695 aaKnown RBP7.67□□□□□ -1.18
USP3-208ENST00000558285 CYP4Z1Q86W10 505 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 UEVLDQ8IX04 471 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 CCDC36Q8IYA8 594 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 DEFB107AQ8IZN7 70 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 CADM3Q8N126 398 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 OR9K2Q8NGE7 335 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 HPS1Q92902 700 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 ZNF486Q96H40 463 aaPredicted RBP7.67□□□□□ -1.18
USP3-208ENST00000558285 HS6ST2Q96MM7 605 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 OXGR1Q96P68 337 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 PIP5K1AQ99755 562 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 DHRS9Q9BPW9 319 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 SLCO5A1Q9H2Y9 848 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 KRCC1Q9NPI7 259 aaPredicted RBP7.67□□□□□ -1.18
USP3-208ENST00000558285 MALT1Q9UDY8 824 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 RNF115Q9Y4L5 304 aa7.67□□□□□ -1.18
USP3-208ENST00000558285 A0A087WUJ7 227 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 LOC102725191A0A1B0GVB3 256 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 ELOVL7A1L3X0 281 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 ZNF726A6NNF4 738 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 ZNF716A6NP11 495 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 SMPD2O60906 423 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 DEAF1O75398 565 aaPredicted RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 AKR7A3O95154 331 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 COX4I1P13073 169 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 JUNBP17275 347 aaPredicted RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 COX5AP20674 150 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 MYF6P23409 242 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 MPGP29372 298 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 RPS5P46782 204 aaKnown RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 TAS2R41P59536 307 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 PRPS1P60891 318 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 UBE2NP61088 152 aaKnown RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 KRR1Q13601 381 aaKnown RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 SLC17A1Q14916 467 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 ACKR1Q16570 336 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 ANKRD34AQ69YU3 496 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 SLC51BQ86UW2 128 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 IGFN1Q86VF2 1251 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 P3H2Q8IVL5 708 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 GPR137CQ8N3F9 429 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 GALNT4Q8N4A0 578 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 PIK3C3Q8NEB9 887 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 GRPEL2Q8TAA5 225 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 TMEM171Q8WVE6 324 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 POP5Q969H6 163 aaKnown RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 TMIGD2Q96BF3 282 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 ZNF300Q96RE9 604 aaPredicted RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 SNX18Q96RF0 628 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 CCL19Q99731 98 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 ARHGDIGQ99819 225 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 MARCH7Q9H992 704 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 FKRPQ9H9S5 495 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 NPAP1Q9NZP6 1156 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 RPS6KA6Q9UK32 745 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 FLVCR1Q9Y5Y0 555 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 A0A0B4J2E0 115 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 A0A1B0GX12 115 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 OR5H1A6NKK0 313 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 CYSRT1A8MQ03 144 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 GCM2O75603 506 aaPredicted RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 ATE1O95260 518 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 PRG2P13727 222 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 PRKACBP22694 351 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 PTAFRP25105 342 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 RBM34P42696 430 aaKnown RBP7.66□□□□□ -1.18
USP3-208ENST00000558285 NUDT2P50583 147 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 FAPQ12884 760 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 PMS2P3Q13401 168 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 DEFB113Q30KQ7 82 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 SHEQ5VZ18 495 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 SPNS3Q6ZMD2 512 aa7.66□□□□□ -1.18
USP3-208ENST00000558285 ZNF704Q6ZNC4 412 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms