RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 HPS1Q92902 700 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 HIST1H2ACQ93077 130 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 MCHR1Q99705 422 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 EBF4Q9BQW3 602 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 EMC6Q9BV81 110 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 ULBP2Q9BZM5 246 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 SLC52A3Q9NQ40 469 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 B3GNT2Q9NY97 397 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 LEF1Q9UJU2 399 aaPredicted RBP11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 TRIM33Q9UPN9 1127 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 NDUFAF1Q9Y375 327 aa11.78□□□□□ -0.52
SNRPA1-204ENST00000558020 TRBV5-3A0A0A0MS03 114 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 PLPP3O14495 311 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 ANGPT2O15123 496 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 SYNGR3O43761 229 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 RAB36O95755 333 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 HPRP00739 348 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 HLA-HP01893 362 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 BGLAPP02818 100 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 ADORA3P0DMS8 318 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 HLA-DOBP13765 273 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 RPS23P62266 143 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 PIGFQ07326 219 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 CAMK2DQ13557 499 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 ADRM1Q16186 407 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 RUNDC3AQ59EK9 446 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 GKAP1Q5VSY0 366 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 REP15Q6BDI9 236 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 KRT80Q6KB66 452 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF627Q7L945 461 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 PIWIL3Q7Z3Z3 882 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 OR5J2Q8NH18 312 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 TXNDC15Q96J42 360 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 ATP6V1G3Q96LB4 118 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 MOGAT1Q96PD6 335 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 BPESC1Q9GZL8 116 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 SEC61A2Q9H9S3 476 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 NOX3Q9HBY0 568 aa11.77□□□□□ -0.53
SNRPA1-204ENST00000558020 TMEM129A0AVI4 362 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 M0QX08 132 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 CHP2O43745 196 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 SEC14L2O76054 403 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 UBL3O95164 117 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 ADRA2AP08913 450 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 IFNGR1P15260 489 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 PCMT1P22061 227 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 GLRXP35754 106 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 PTDSS1P48651 473 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 CSNK1A1P48729 337 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 SELENOVP59797 346 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 RAB1AP62820 205 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 INTS11Q5TA45 600 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 LIPNQ5VXI9 398 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 TTC33Q6PID6 262 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 DLEU7Q6UYE1 221 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 PATL1Q86TB9 770 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 COMTD1Q86VU5 262 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 C10orf111Q8N326 155 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 ARIH2OSQ8N7S6 290 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 SMYD1Q8NB12 490 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 SLC26A7Q8TE54 656 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 TSPEARQ8WU66 669 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 RASSF5Q8WWW0 418 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 RSPO3Q9BXY4 272 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 IKZF5Q9H5V7 419 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 NANSQ9NR45 359 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 MED29Q9NX70 200 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 REV1Q9UBZ9 1251 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 GPR160Q9UJ42 338 aa11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 ANK3Q12955 4377 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-204ENST00000558020 M0R233 179 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 TPST2O60704 377 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 SERPINI2O75830 405 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 FARS2O95363 451 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 TACSTD2P09758 323 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF35P13682 527 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 B4GALT1P15291 398 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 IGFBP5P24593 272 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 APEX1P27695 318 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 BIDP55957 195 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 DUSP7Q16829 419 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 PHYHD1Q5SRE7 291 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 LINC00114Q6XXX2 140 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 DPPA2Q7Z7J5 298 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 DHDDSQ86SQ9 333 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 MYPOPQ86VE0 399 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 DPP10Q8N608 796 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 LINC01356Q8N9X3 169 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 OR6X1Q8NH79 312 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 STON2Q8WXE9 905 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 MRPL24Q96A35 216 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 MPP4Q96JB8 637 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 FOXB1Q99853 325 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 CPPED1Q9BRF8 314 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 SLC19A3Q9BZV2 496 aa11.75□□□□□ -0.53
SNRPA1-204ENST00000558020 INTS9Q9NV88 658 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms