RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZNF784Q8NCA9 323 aaPredicted RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 OR51S1Q8NGJ8 323 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 OR9A4Q8NGU2 314 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 RPS4Y2Q8TD47 263 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 SCARB1Q8WTV0 552 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 FBXW5Q969U6 566 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 MRPL48Q96GC5 212 aaKnown RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 GAL3ST1Q99999 423 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 RABL2AQ9UBK7 228 aaPredicted RBP10.38□□□□□ -0.75
SRP54-213ENST00000556994 RABL2BQ9UNT1 228 aa10.38□□□□□ -0.75
SRP54-213ENST00000556994 EYSQ5T1H1 3165 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 A8MXK9 166 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 F5H5P2 479 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 TNFSF14O43557 240 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 B3GALNT1O75752 331 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 KDM4BO94953 1096 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 ICAM2P13598 275 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 GTF2F2P13984 249 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 PPP3CBP16298 524 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 GPR143P51810 404 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 PRMT2P55345 433 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 MRPS10P82664 201 aaKnown RBP10.37□□□□□ -0.75
SRP54-213ENST00000556994 MAT1AQ00266 395 aaKnown RBP10.37□□□□□ -0.75
SRP54-213ENST00000556994 SORDQ00796 357 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 RBMS2Q15434 407 aaKnown RBP10.37□□□□□ -0.75
SRP54-213ENST00000556994 ZNHIT3Q15649 155 aaPredicted RBP10.37□□□□□ -0.75
SRP54-213ENST00000556994 SLC35D3Q5M8T2 416 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 ZNF776Q68DI1 518 aaPredicted RBP10.37□□□□□ -0.75
SRP54-213ENST00000556994 C11orf88Q6PI97 169 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 ATRAIDQ6UW56 229 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 NPSR1Q6W5P4 371 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 ZNF550Q7Z398 422 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 FAM220AQ7Z4H9 259 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 BIVMQ86UB2 503 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 JAZF1Q86VZ6 243 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 OR2AK2Q8NG84 335 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 TNFAIP8L1Q8WVP5 186 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 TMEM106AQ96A25 262 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 UTP23Q9BRU9 249 aaKnown RBP10.37□□□□□ -0.75
SRP54-213ENST00000556994 EXOSC3Q9NQT5 275 aaKnown RBP10.37□□□□□ -0.75
SRP54-213ENST00000556994 ZNF337Q9Y3M9 751 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 RWDD3Q9Y3V2 267 aa10.37□□□□□ -0.75
SRP54-213ENST00000556994 TRAV18A0A075B6X5 111 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 TMEM272A0A1B0GTI8 110 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 TGFBR3LH3BV60 316 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 H7C417 338 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 PLRG1O43660 514 aaKnown RBP10.36□□□□□ -0.75
SRP54-213ENST00000556994 GMFGO60234 142 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 TACSTD2P09758 323 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 FCARP24071 287 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 GK2Q14410 553 aaPredicted RBP10.36□□□□□ -0.75
SRP54-213ENST00000556994 C4orf46Q504U0 113 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 TMEM31Q5JXX7 168 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ZNF660Q6AZW8 331 aaPredicted RBP10.36□□□□□ -0.75
SRP54-213ENST00000556994 FAM122CQ6P4D5 195 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ZNF676Q8N7Q3 588 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ZNF454Q8N9F8 522 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 OR52H1Q8NGJ2 320 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 CCDC74AQ96AQ1 378 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 SCARF2Q96GP6 870 aaPredicted RBP10.36□□□□□ -0.75
SRP54-213ENST00000556994 LRFN5Q96NI6 719 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 FOXN4Q96NZ1 517 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 MOGAT1Q96PD6 335 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 IL23AQ9NPF7 189 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 POLE3Q9NRF9 147 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 MTFP1Q9UDX5 166 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 F5P12259 2224 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 IGKV1D-42A0A075B6H8 117 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 TOR1AO14656 332 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ARPC3O15145 178 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 XRCC3O43542 346 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 RLN2P04090 185 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 CD3DP04234 171 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 APODP05090 189 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 MECP2P51608 486 aaKnown RBP10.36□□□□□ -0.75
SRP54-213ENST00000556994 CCR4P51679 360 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ARHGDIBP52566 201 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 CTXN1P60606 82 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ENPP2Q13822 863 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ZNF273Q14593 569 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 LRRC69Q6ZNQ3 347 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 OVCH2Q7RTZ1 564 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 DPY19L4Q7Z388 723 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.36□□□□□ -0.75
SRP54-213ENST00000556994 CSNK1A1LQ8N752 337 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 LSM14AQ8ND56 463 aaKnown RBP10.36□□□□□ -0.75
SRP54-213ENST00000556994 BVESQ8NE79 360 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 OR6N2Q8NGY6 317 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 NSMAFQ92636 917 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 RELTQ969Z4 430 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 C3orf49Q96BT1 292 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 LMF1Q96S06 567 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 AIFM2Q9BRQ8 373 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 WDR76Q9H967 626 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 MED11Q9P086 117 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 ZNF230Q9UIE0 474 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms