RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 TRIM40Q6P9F5 258 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 TMIGD1Q6UXZ0 262 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 FRA10AC1Q70Z53 315 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 THOC6Q86W42 341 aaKnown RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 DND1Q8IYX4 353 aaKnown RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 FBXW8Q8N3Y1 598 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 LRTM2Q8N967 370 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 APCDD1LQ8NCL9 501 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 MORN4Q8NDC4 146 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 NFAM1Q8NET5 270 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 OR8K3Q8NH51 312 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 SLC22A8Q8TCC7 542 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 GRK7Q8WTQ7 553 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 SLC5A11Q8WWX8 675 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 ANKRD7Q92527 254 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 PIK3R3Q92569 461 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 NRGNQ92686 78 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 NEIL2Q969S2 332 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 MAGOHBQ96A72 148 aaKnown RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 RBM18Q96H35 190 aaKnown RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 VPS39Q96JC1 886 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 POM121L2Q96KW2 1035 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 JSRP1Q96MG2 331 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 TSNARE1Q96NA8 513 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 RUNDC3BQ96NL0 473 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 NDNQ99608 321 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 CENPKQ9BS16 269 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 DESI2Q9BSY9 194 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 DGCR6LQ9BY27 220 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 ROGDIQ9GZN7 287 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 ZDHHC11Q9H8X9 412 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 IL1RL2Q9HB29 575 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 IARS2Q9NSE4 1012 aaKnown RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 ASIC3Q9UHC3 531 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 BOKQ9UMX3 212 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 PLEKHA6Q9Y2H5 1048 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 L3MBTL1Q9Y468 752 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 PIKFYVEQ9Y2I7 2098 aa4.25□□□□□ -1.73
HIF1A-209ENST00000556827 TEP1Q99973 2627 aaKnown RBP4.25□□□□□ -1.73
HIF1A-209ENST00000556827 MED13Q9UHV7 2174 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 CRYBG3Q68DQ2 2970 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 C15orf38-AP3S2A0A0A6YYH1 394 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 IQANK1A0A1B0GTG1 560 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 C17orf105B2RV13 164 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 G3V3Y1 287 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 TP53I11O14683 189 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 CTNSO60931 367 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 OR6B1O95007 311 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 IGHG3P01860 377 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 C1GALT1C1LP0DN25 315 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 PGAM1P18669 254 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 SOX3P41225 446 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 PLA2G16P53816 162 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 MTTPP55157 894 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 XGP55808 180 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 RPP38P78345 283 aaKnown RBP4.24□□□□□ -1.73
HIF1A-209ENST00000556827 BIKQ13323 160 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 SIX1Q15475 284 aaPredicted RBP4.24□□□□□ -1.73
HIF1A-209ENST00000556827 DEFB113Q30KQ7 82 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 SPANXN3Q5MJ09 141 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 TRAT1Q6PIZ9 186 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 SCIMPQ6UWF3 145 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 MBOAT1Q6ZNC8 495 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 CDC20BQ86Y33 519 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 KLHDC8AQ8IYD2 350 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 CA13Q8N1Q1 262 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 RPRMLQ8N4K4 120 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 TMEM251Q8N6I4 163 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 ZNF614Q8N883 585 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 OR2L5Q8NG80 312 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 RNASE6Q93091 150 aaKnown RBP4.24□□□□□ -1.73
HIF1A-209ENST00000556827 C18orf12Q96KH6 178 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 LINC00479Q96M42 142 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 SERPINB12Q96P63 405 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 RASL10BQ96S79 203 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 KRT12Q99456 494 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 DOHHQ9BU89 302 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 LIN28AQ9H9Z2 209 aaKnown RBP4.24□□□□□ -1.73
HIF1A-209ENST00000556827 RAB9BQ9NP90 201 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 DEPPQ9NTK1 212 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 CNIH4Q9P003 139 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 ZNF629Q9UEG4 869 aaPredicted RBP4.24□□□□□ -1.73
HIF1A-209ENST00000556827 EIF3LQ9Y262 564 aaKnown RBP4.24□□□□□ -1.73
HIF1A-209ENST00000556827 SLC22A14Q9Y267 594 aa4.24□□□□□ -1.73
HIF1A-209ENST00000556827 PRRC2CQ9Y520 2896 aaKnown RBP4.24□□□□□ -1.73
HIF1A-209ENST00000556827 POLEQ07864 2286 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 A0A0G2JN53 185 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 TRBV4-1A0A0J9YWV2 114 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 A0A1W2PPW3 197 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 LRIT2A6NDA9 550 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 ANXA2P2A6NMY6 339 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 C15orf61A6NNL5 157 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 EEF1E1-BLOC1S5C9J1V9 151 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 EEF1E1O43324 174 aaKnown RBP4.23□□□□□ -1.73
HIF1A-209ENST00000556827 PRAF2O60831 178 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 DNAJB6O75190 326 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 TRAPPC6AO75865 159 aa4.23□□□□□ -1.73
HIF1A-209ENST00000556827 GLSO94925 669 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms