RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CDH16O75309 829 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 STAMBPO95630 424 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 CST1P01037 141 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 SEMG1P04279 462 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 P04436 131 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 PABPC4LP0CB38 370 aaKnown RBP3.25□□□□□ -1.89
PRPF39-210ENST00000556718 ANXA8P13928 327 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 NQO1P15559 274 aaKnown RBP3.25□□□□□ -1.89
PRPF39-210ENST00000556718 GATA1P15976 413 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-210ENST00000556718 EIF2S2P20042 333 aaKnown RBP3.25□□□□□ -1.89
PRPF39-210ENST00000556718 OR3A4PP47883 348 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 KPNA2P52292 529 aaKnown RBP3.25□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF77Q15935 545 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 DGUOKQ16854 277 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 NSUN5P1Q3KNT7 163 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 VPS26BQ4G0F5 336 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 CARD16Q5EG05 197 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 ANXA8L1Q5VT79 327 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 LRRC66Q68CR7 880 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 TIGD3Q6B0B8 471 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 CGB2Q6NT52 195 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 CXCL17Q6UXB2 119 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 Q6ZN92 141 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF571Q7Z3V5 609 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-210ENST00000556718 VRK2Q86Y07 508 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF100Q8IYN0 542 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 MMGT1Q8N4V1 131 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF525Q8N782 197 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 TPRX1Q8N7U7 411 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 ACOT4Q8N9L9 421 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 CCDC71LQ8N9Z2 235 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 SDR9C7Q8NEX9 313 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 OR4F6Q8NGB9 312 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 PYROXD1Q8WU10 500 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 FGF11Q92914 225 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 SLC25A38Q96DW6 304 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 ATP6V1G3Q96LB4 118 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 C12orf42Q96LP6 360 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 CGREF1Q99674 301 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 KLHDC3Q9BQ90 382 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 MRPL45Q9BRJ2 306 aaKnown RBP3.25□□□□□ -1.89
PRPF39-210ENST00000556718 MFFQ9GZY8 342 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 DRC3Q9H069 523 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 GBA3Q9H227 469 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 HAUS4Q9H6D7 363 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 LZTFL1Q9NQ48 299 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 KCNIP1Q9NZI2 227 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 BTNL2Q9UIR0 455 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 TRAF3IP3Q9Y228 551 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 STARD10Q9Y365 291 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 USH1CQ9Y6N9 552 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 V9GY05 133 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 DAPK1P53355 1430 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 PIK3R4Q99570 1358 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 CFTRP13569 1480 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 SMIM31A0A1B0GVY4 71 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 TUBAL3A6NHL2 446 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 SRRM5B3KS81 715 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 MBTPS2O43462 519 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 TRAPPC3O43617 180 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 SOX15O60248 233 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 KRT6AP02538 564 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 FTH1P02794 183 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ABOP16442 354 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ATP6V1B2P21281 511 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 KITLGP21583 273 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 SLC2A5P22732 501 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 TMED10P49755 219 aaKnown RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 MEOX2P50222 304 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ACLYP53396 1101 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 CDH6P55285 790 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 C21orf59P57076 290 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 RPS14P62263 151 aaKnown RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 IL18Q14116 193 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 KIAA0040Q15053 153 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 STK38Q15208 465 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 PRR30Q53SZ7 412 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 MARCH8Q5T0T0 291 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 AGBL2Q5U5Z8 902 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 C11orf71Q6IPW1 123 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 C19orf35Q6ZS72 473 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 HSD17B13Q7Z5P4 300 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF589Q86UQ0 364 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 P2RY8Q86VZ1 359 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 HPS6Q86YV9 775 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ST13P4Q8IZP2 240 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 GPD1LQ8N335 351 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 MREGQ8N565 214 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ZPLD1Q8TCW7 415 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 GPR151Q8TDV0 419 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 DNAJC9Q8WXX5 260 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 SLC38A4Q969I6 547 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 CHMP6Q96FZ7 201 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF578Q96N58 590 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-210ENST00000556718 SIKE1Q9BRV8 207 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 OSBPL10Q9BXB5 764 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 ACTR6Q9GZN1 396 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 EHD1Q9H4M9 534 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 TMEM185BQ9H7F4 350 aa3.24□□□□□ -1.89
PRPF39-210ENST00000556718 PLGRKTQ9HBL7 147 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms