RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MELKQ14680 651 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 TRMT5Q32P41 509 aaKnown RBP9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 SWT1Q5T5J6 900 aaKnown RBP9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 GKAP1Q5VSY0 366 aaPredicted RBP9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 CXXC5Q7LFL8 322 aaKnown RBP9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 PXKQ7Z7A4 578 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 PATL1Q86TB9 770 aaKnown RBP9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 RBM45Q8IUH3 476 aaKnown RBP9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 TMEM123Q8N131 208 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 DPP10Q8N608 796 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 FAM169BQ8N8A8 192 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 NUP37Q8NFH4 326 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 GPR32P1Q8NGA4 272 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 ADAMTS16Q8TE57 1224 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 RASSF5Q8WWW0 418 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 SLC41A3Q96GZ6 507 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 LRR1Q96L50 414 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 FOXB1Q99853 325 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 ECSITQ9BQ95 431 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 SIKE1Q9BRV8 207 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 TMEM120AQ9BXJ8 343 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 SHARPINQ9H0F6 387 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 PLK3Q9H4B4 646 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 CHODLQ9H9P2 273 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 MYOZ1Q9NP98 299 aaPredicted RBP9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 NANSQ9NR45 359 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 MRPL39Q9NYK5 338 aaKnown RBP9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 SPEF1Q9Y4P9 236 aa9.17□□□□□ -0.94
SPTLC2-205ENST00000556607 LOC100289279A0A1B0GTE1 492 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 TRAPPC13A5PLN9 417 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 RNF212BA8MTL3 300 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 BLOC1S5-TXNDC5H3BN57 136 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 NDUFS8O00217 210 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 LMX1BO60663 402 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 FMO6PO60774 539 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 IGHV4-31P0DP07 118 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 TROVE2P10155 538 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 NR4A2P43354 598 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 GZMKP49863 264 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 PPOXP50336 477 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 PCBP3P57721 371 aaKnown RBP9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 RAB1AP62820 205 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 HGFACQ04756 655 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 CYLC2Q14093 348 aaPredicted RBP9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 EFNB3Q15768 340 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 VMACQ2NL98 169 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 SLC35D2Q76EJ3 337 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 ZCCHC24Q8N2G6 241 aaKnown RBP9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 TSPEARQ8WU66 669 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 MS4A3Q96HJ5 214 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 TPK1Q9H3S4 243 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 ZNF442Q9H7R0 627 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 KAT8Q9H7Z6 458 aaKnown RBP9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 RNF121Q9H920 327 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 VIPAS39Q9H9C1 493 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 NOX3Q9HBY0 568 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 FBXO9Q9UK97 447 aaPredicted RBP9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 CDC42EP3Q9UKI2 254 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 KCNS2Q9ULS6 477 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 SH3GLB1Q9Y371 365 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 CMAHPQ9Y471 501 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 MTORP42345 2549 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 FN1P02751 2386 aaKnown RBP9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 NAV3Q8IVL0 2385 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 ARFGEF3Q5TH69 2177 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 ALPK2Q86TB3 2170 aa9.16□□□□□ -0.94
SPTLC2-205ENST00000556607 A0A096LNT2 108 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 FZD7O75084 574 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 UBL3O95164 117 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 ADRA2AP08913 450 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 DAOP14920 347 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 LSP1P33241 339 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 PCGF2P35227 344 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 ARFIP2P53365 341 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 CLRN1P58418 232 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 TAS2R41P59536 307 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 NPTX1Q15818 432 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 ZNF74Q16587 644 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 METTL21CQ5VZV1 264 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 FAM166AQ6J272 317 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 NANOGP8Q6NSW7 305 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 LINC00114Q6XXX2 140 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 WDR88Q6ZMY6 472 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 DEF8Q6ZN54 512 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 IL17RELQ6ZVW7 336 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 NANOGNBQ7Z5D8 188 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 LRRC17Q8N6Y2 441 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 ZNF540Q8NDQ6 660 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 OR4D11Q8NGI4 311 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 NEU4Q8WWR8 484 aaPredicted RBP9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 STON2Q8WXE9 905 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 ZNF566Q969W8 418 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 TAMM41Q96BW9 452 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 SH3GL1Q99961 368 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 BPESC1Q9GZL8 116 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 ZNF385DQ9H6B1 395 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 NANOGQ9H9S0 305 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 GLTPQ9NZD2 209 aa9.15□□□□□ -0.94
SPTLC2-205ENST00000556607 HIVEP2P31629 2446 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms