RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MEX3DQ86XN8 651 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 STHQ8IWL8 128 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 CLEC4FQ8N1N0 589 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 RNF175Q8N4F7 328 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 CBR4Q8N4T8 237 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 LINC01555Q8NAE3 123 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ZNF740Q8NDX6 193 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ZNF555Q8NEP9 628 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 GJC3Q8NFK1 279 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 OR2L5Q8NG80 312 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 NT5CQ8TCD5 201 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PNPT1Q8TCS8 783 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 SFXN5Q8TD22 340 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 EMG1Q92979 244 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 TM4SF18Q96CE8 201 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 AURKBQ96GD4 344 aaPredicted RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 ZC3HAV1LQ96H79 300 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 F2RL3Q96RI0 385 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ZNF347Q96SE7 839 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 CITED1Q99966 193 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 C17orf62Q9BQA9 187 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 UQCC2Q9BRT2 126 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PCGF1Q9BSM1 259 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ALKBH7Q9BT30 221 aaPredicted RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 DPH7Q9BTV6 452 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ABHD14AQ9BUJ0 271 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 SF3B5Q9BWJ5 86 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 MRPS26Q9BYN8 205 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 SLC26A1Q9H2B4 701 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 SPNS1Q9H2V7 528 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 FZD3Q9NPG1 666 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 IL1RAPQ9NPH3 570 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 MS4A12Q9NXJ0 267 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 USE1Q9NZ43 259 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ONECUT1Q9UBC0 465 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ENOPH1Q9UHY7 261 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PHF11Q9UIL8 331 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 C3orf18Q9UK00 162 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 FBXO4Q9UKT5 387 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 NDRG2Q9UN36 371 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 GAB2Q9UQC2 676 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 NEUROG3Q9Y4Z2 214 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 KLK4Q9Y5K2 254 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PCYT1BQ9Y5K3 369 aaPredicted RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 A3GALT2U3KPV4 340 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 NUP214P35658 2090 aaPredicted RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 A0A087WXM4 84 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 A0A0A6YYD5 115 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 A0A0J9YY10 115 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SMIM31A0A1B0GVY4 71 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 LRIT2A6NDA9 550 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 ANTXRLA6NF34 631 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 C5orf58C9J3I9 102 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 G3V2T6 193 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SAP18O00422 153 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 VCYO14598 125 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 EI24O14681 340 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 HAT1O14929 419 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 ACOX3O15254 700 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 ERI3O43414 337 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 LCMT2O60294 686 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 FCMRO60667 390 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 UGT2B11O75310 529 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SH3BGRLO75368 114 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SERPINI2O75830 405 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 ZNF682O95780 498 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 CLPTM1O96005 669 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 PLAUP00749 431 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 OPN1LWP04000 364 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SERPIND1P05546 499 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 IFI6P09912 130 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 CSNK2A2P19784 350 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 HNF1AP20823 631 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 HIST1H1TP22492 207 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 PSMB5P28074 263 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 PPP2R1BP30154 601 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 MPIP34949 423 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 RPL5P46777 297 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 SMIM11AP58511 58 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 DSTNP60981 165 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SELENOWP63302 87 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 HBA1P69905 142 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 IL18R1Q13478 541 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 NR1D2Q14995 579 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 ELOCQ15369 112 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 NRF1Q16656 503 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 EXOC3L2Q2M3D2 409 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 C2orf68Q2NKX9 166 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 CTU2Q2VPK5 515 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 HIKESHIQ53FT3 197 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 PRAMEF5Q5TYX0 476 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 PRAMEF6Q5VXH4 476 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 SAXO2Q658L1 398 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 OR2T5Q6IEZ7 315 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 REEP3Q6NUK4 255 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 DUS1LQ6P1R4 473 aaKnown RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 TTC33Q6PID6 262 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 ZNF474Q6S9Z5 364 aaPredicted RBP4.6□□□□□ -1.67
SRP54-211ENST00000556445 UGT2A3Q6UWM9 527 aa4.6□□□□□ -1.67
SRP54-211ENST00000556445 ENPP6Q6UWR7 440 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms