RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 IL5P05113 134 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 GLULP15104 373 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 C4BPBP20851 252 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 TAS2R20P59543 309 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 ZP1P60852 638 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 DCAF7P61962 342 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 LTBQ06643 244 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 ELOCQ15369 112 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF227Q86WZ6 799 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 BEST4Q8NFU0 473 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 ORAI1Q96D31 301 aa12.26□□□□□ -0.45
SHMT2-222ENST00000555774 GPN1Q9HCN4 374 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-222ENST00000555774 NPDC1Q9NQX5 325 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-222ENST00000555774 NUP210LQ5VU65 1888 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 TMEM131Q92545 1883 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 A0A1W2PQ72 361 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 HPXP02790 462 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 ALOX5APP20292 161 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 CDK2P24941 298 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 MST1P26927 711 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 CD1CP29017 333 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 CENPAP49450 140 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 LGALSLQ3ZCW2 172 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 MTFR2Q6P444 385 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 FDX2Q6P4F2 183 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 APOOLQ6UXV4 268 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 GLDNQ6ZMI3 551 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 NLRC3Q7RTR2 1065 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF563Q8TA94 476 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 GPR148Q8TDV2 347 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 PTPMT1Q8WUK0 201 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 MSANTD3Q96H12 275 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 TSSK2Q96PF2 358 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 LMF1Q96S06 567 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 PDE7BQ9NP56 450 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 NKIRAS2Q9NYR9 191 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 WSB2Q9NYS7 404 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 TAS2R5Q9NYW4 299 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 TLCD2A6NGC4 264 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 ANXA2P2A6NMY6 339 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 SNRPGP15A8MWD9 76 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 TMEM150CB9EJG8 249 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 GLSO94925 669 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 ANXA2P07355 339 aaKnown RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 IFNGR1P15260 489 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 ADRA2CP18825 462 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 TACR3P29371 465 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 FAUP35544 74 aaKnown RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 VEGFCP49767 419 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 AP2S1P53680 142 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 DHODHQ02127 395 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 CBLN3Q6UW01 205 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 GKN2Q86XP6 184 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 CCDC28AQ8IWP9 274 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 FRMD1Q8N878 549 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 OR2G2Q8NGZ5 317 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 OR1F2PQ96R84 312 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 INTS14Q96SY0 518 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 SLC38A3Q99624 504 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 OR10A4Q9H209 315 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 SRA1Q9HD15 236 aaKnown RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 LANCL2Q9NS86 450 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 MRPL15Q9P015 296 aaKnown RBP12.25□□□□□ -0.45
SHMT2-222ENST00000555774 IKZF2Q9UKS7 526 aa12.25□□□□□ -0.45
SHMT2-222ENST00000555774 OR2W5A6NFC9 320 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 TTLL8A6PVC2 850 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 ARPC1BO15143 372 aaKnown RBP12.24□□□□□ -0.45
SHMT2-222ENST00000555774 F13BP05160 661 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 SYPP08247 313 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 BLVRAP53004 296 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 CLDN12P56749 244 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 ARPC4P59998 168 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 SNTA1Q13424 505 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 TMEM255AQ5JRV8 349 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 SERPINA12Q8IW75 414 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF676Q8N7Q3 588 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 OR2T35Q8NGX2 323 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 OR6N2Q8NGY6 317 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 KTI12Q96EK9 354 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-222ENST00000555774 GPR174Q9BXC1 333 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 NXF5Q9H1B4 397 aaKnown RBP12.24□□□□□ -0.45
SHMT2-222ENST00000555774 NOX3Q9HBY0 568 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 SOHLH2Q9NX45 425 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 TAS2R8Q9NYW2 309 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 EIF3KQ9UBQ5 218 aaKnown RBP12.24□□□□□ -0.45
SHMT2-222ENST00000555774 KLK11Q9UBX7 282 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 STEAP1Q9UHE8 339 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 FLVCR2Q9UPI3 526 aa12.24□□□□□ -0.45
SHMT2-222ENST00000555774 TMEM184BQ9Y519 407 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-222ENST00000555774 TRAV36DV7A0A075B6V5 113 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 A0A1W2PQD3 144 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 TUBAL3A6NHL2 446 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 C4orf47A7E2U8 309 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 XRCC3O43542 346 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 CDC40O60508 579 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 EIF4E2O60573 245 aaKnown RBP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 NDUFB6O95139 128 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms