RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CALCRP30988 508 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 CSNK1A1P48729 337 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 EFNA4P52798 201 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 TAS2R41P59536 307 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 ZNF813Q6ZN06 617 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 DEF8Q6ZN54 512 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 MDP1Q86V88 176 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 CALHM3Q86XJ0 350 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 NANOS1Q8WY41 292 aaKnown RBP21.25■□□□□ 0.99
PRKCH-216ENST00000555542 VRK1Q99986 396 aaPredicted RBP21.25■□□□□ 0.99
PRKCH-216ENST00000555542 SLC19A3Q9BZV2 496 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 PCDHAC1Q9H158 963 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 HIVEP2P31629 2446 aa21.25■□□□□ 0.99
PRKCH-216ENST00000555542 FN1P02751 2386 aaKnown RBP21.24■□□□□ 0.99
PRKCH-216ENST00000555542 VSTM5A8MXK1 200 aa21.24■□□□□ 0.99
PRKCH-216ENST00000555542 OR4A8P0C604 315 aa21.24■□□□□ 0.99
PRKCH-216ENST00000555542 B4GALT1P15291 398 aa21.24■□□□□ 0.99
PRKCH-216ENST00000555542 TNFRSF1BP20333 461 aa21.24■□□□□ 0.99
PRKCH-216ENST00000555542 CRYBA2P53672 197 aa21.24■□□□□ 0.99
PRKCH-216ENST00000555542 LRRC23Q53EV4 343 aaPredicted RBP21.24■□□□□ 0.99
PRKCH-216ENST00000555542 SLC35D2Q76EJ3 337 aa21.24■□□□□ 0.99
PRKCH-216ENST00000555542 ZNF229Q9UJW7 825 aa21.24■□□□□ 0.99
PRKCH-216ENST00000555542 NSD1Q96L73 2696 aaPredicted RBP21.24■□□□□ 0.99
PRKCH-216ENST00000555542 CSPG4Q6UVK1 2322 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 ZNF503-AS2A6NEH8 195 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 LYPD3O95274 346 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 HLA-HP01893 362 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 CSF3P09919 207 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 KRTAP1-1Q07627 177 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 SWI5Q1ZZU3 235 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 GSG1Q2KHT4 349 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 NANOGNBQ7Z5D8 188 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 MYPOPQ86VE0 399 aaPredicted RBP21.23■□□□□ 0.99
PRKCH-216ENST00000555542 TSPYL5Q86VY4 417 aaPredicted RBP21.23■□□□□ 0.99
PRKCH-216ENST00000555542 LRRC17Q8N6Y2 441 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 OR10H5Q8NGA6 315 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 C10orf82Q8WW14 230 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 ALPK2Q86TB3 2170 aa21.23■□□□□ 0.99
PRKCH-216ENST00000555542 FAM220BPB1ANY3 271 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 B9A039 149 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 SHOX2O60902 331 aaPredicted RBP21.22■□□□□ 0.99
PRKCH-216ENST00000555542 PDE5AO76074 875 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 LY6HO94772 140 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 SLC25A16P16260 332 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 PIGFQ07326 219 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 MELKQ14680 651 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 ADIPOQQ15848 244 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 MST1LQ2TV78 715 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 NUP37Q8NFH4 326 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 IL17RDQ8NFM7 739 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 OR2T12Q8NG77 320 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 TPD52L3Q96J77 140 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 ZNF583Q96ND8 569 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 FOXB1Q99853 325 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 YAE1D1Q9NRH1 226 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 TAS2R5Q9NYW4 299 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 ARMCX1Q9P291 453 aa21.22■□□□□ 0.99
PRKCH-216ENST00000555542 BLOC1S5-TXNDC5H3BN57 136 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 CD5LO43866 347 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 F12P00748 615 aaPredicted RBP21.21■□□□□ 0.99
PRKCH-216ENST00000555542 OR1E2P47887 323 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 ZP4Q12836 540 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 CARTPTQ16568 116 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 WDFY1Q8IWB7 410 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 POU5F2Q8N7G0 328 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 OR6X1Q8NH79 312 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 ZNF566Q969W8 418 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 RCN3Q96D15 328 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 PRSS27Q9BQR3 290 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 ZNF426Q9BUY5 554 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 CCDC134Q9H6E4 229 aa21.21■□□□□ 0.99
PRKCH-216ENST00000555542 TLN2Q9Y4G6 2542 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 IGHV2OR16-5A0A0B4J2B6 119 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 SLC22A2O15244 555 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 TLX2O43763 284 aaPredicted RBP21.2■□□□□ 0.98
PRKCH-216ENST00000555542 RAB36O95755 333 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 PTDSS1P48651 473 aaKnown RBP21.2■□□□□ 0.98
PRKCH-216ENST00000555542 HGFACQ04756 655 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 CYBRD1Q53TN4 286 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 KRT80Q6KB66 452 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 NHLRC1Q6VVB1 395 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 SORCS2Q96PQ0 1159 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 POLR2J2Q9GZM3 115 aaKnown RBP21.2■□□□□ 0.98
PRKCH-216ENST00000555542 POLR2J3Q9H1A7 115 aaKnown RBP21.2■□□□□ 0.98
PRKCH-216ENST00000555542 MED4Q9NPJ6 270 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 GLTPQ9NZD2 209 aa21.2■□□□□ 0.98
PRKCH-216ENST00000555542 MCIDASD6RGH6 385 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 GPRIN2O60269 458 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 OR5F1O95221 314 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 BCL10O95999 233 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 MT-ND1P03886 318 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 ASAH2BP0C7U1 165 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 NPR2P20594 1047 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 THBS4P35443 961 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 RBM34P42696 430 aaKnown RBP21.19■□□□□ 0.98
PRKCH-216ENST00000555542 PDLIM4P50479 330 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 SNTB2Q13425 540 aaKnown RBP21.19■□□□□ 0.98
PRKCH-216ENST00000555542 PIN1Q13526 163 aaPredicted RBP21.19■□□□□ 0.98
PRKCH-216ENST00000555542 DAG1Q14118 895 aa21.19■□□□□ 0.98
PRKCH-216ENST00000555542 EFNB3Q15768 340 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms