RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TEP1Q99973 2627 aaKnown RBP10.61□□□□□ -0.71
SRP54-206ENST00000555317 A0A096LPE4 126 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 A0A1W2PPZ6 126 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 EFCAB9A8MZ26 197 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 RPL36A-HNRNPH2H7BZ11 118 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 hCG_2039718K7EN88 272 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 HS3ST1O14792 307 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 IGHG1P01857 330 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 PAX7P23759 505 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 PTAFRP25105 342 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 LOXP28300 417 aaPredicted RBP10.61□□□□□ -0.71
SRP54-206ENST00000555317 CDH11P55287 796 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 CLRN1P58418 232 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 SMIM11AP58511 58 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 ARF1P84077 181 aaKnown RBP10.61□□□□□ -0.71
SRP54-206ENST00000555317 RPL18Q07020 188 aaKnown RBP10.61□□□□□ -0.71
SRP54-206ENST00000555317 CEACAM16Q2WEN9 425 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 TBRG1Q3YBR2 411 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 MTX3Q5HYI7 312 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 ADAM5Q6NVV9 412 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 SLC22A25Q6T423 547 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 RNF113BQ8IZP6 322 aaKnown RBP10.61□□□□□ -0.71
SRP54-206ENST00000555317 OR6X1Q8NH79 312 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 FBXW5Q969U6 566 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 MBD6Q96DN6 1003 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 ALPK1Q96QP1 1244 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 PIP5K1AQ99755 562 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 C1QTNF6Q9BXI9 259 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 MUC13Q9H3R2 512 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 NMNAT1Q9HAN9 279 aaPredicted RBP10.61□□□□□ -0.71
SRP54-206ENST00000555317 INIPQ9NRY2 104 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 FAIMQ9NVQ4 179 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 BEX4Q9NWD9 120 aaPredicted RBP10.61□□□□□ -0.71
SRP54-206ENST00000555317 NPAP1Q9NZP6 1156 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 PRPF19Q9UMS4 504 aaKnown RBP10.61□□□□□ -0.71
SRP54-206ENST00000555317 TMEM5Q9Y2B1 443 aa10.61□□□□□ -0.71
SRP54-206ENST00000555317 A0A1W2PRQ8 180 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 DPRXA6NFQ7 191 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 ZNF99A8MXY4 864 aaPredicted RBP10.6□□□□□ -0.71
SRP54-206ENST00000555317 FFAR1O14842 300 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 SMPD2O60906 423 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 ENTPD5O75356 428 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 PLAUP00749 431 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 F13BP05160 661 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 FABP3P05413 133 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 NR2C1P13056 603 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
SRP54-206ENST00000555317 CD40P25942 277 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 AQP2P41181 271 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 SLC9A3P48764 834 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 SPIBQ01892 262 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 DGCR6Q14129 220 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 MELKQ14680 651 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 FXNQ16595 210 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 DEFB113Q30KQ7 82 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 ALG10Q5BKT4 473 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 CYP2R1Q6VVX0 501 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 RINLQ6ZS11 566 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 MBOAT2Q6ZWT7 520 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 LINGO2Q7L985 606 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 OAFQ86UD1 273 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 DHFR2Q86XF0 187 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 CCDC36Q8IYA8 594 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 WDR31Q8NA23 367 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 KBTBD8Q8NFY9 601 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 TMEM171Q8WVE6 324 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 NANOS1Q8WY41 292 aaKnown RBP10.6□□□□□ -0.71
SRP54-206ENST00000555317 SLC25A44Q96H78 314 aaPredicted RBP10.6□□□□□ -0.71
SRP54-206ENST00000555317 LRGUKQ96M69 825 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 FOXC2Q99958 501 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 TMEM204Q9BSN7 226 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 CXorf56Q9H5V9 222 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 MAN2C1Q9NTJ4 1040 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 NDUFAF4Q9P032 175 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 FLNAP21333 2647 aaKnown RBP10.6□□□□□ -0.71
SRP54-206ENST00000555317 HIVEP1P15822 2718 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 USF3Q68DE3 2245 aa10.6□□□□□ -0.71
SRP54-206ENST00000555317 PRRC2AP48634 2157 aaKnown RBP10.59□□□□□ -0.71
SRP54-206ENST00000555317 ARPC4-TTLL3A0A0A6YYG9 625 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 PDE5AO76074 875 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 CD53P19397 219 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 RPL4P36578 427 aaKnown RBP10.59□□□□□ -0.71
SRP54-206ENST00000555317 GPR4P46093 362 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 VLDLRP98155 873 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 PRKCDQ05655 676 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 TOP3AQ13472 1001 aaPredicted RBP10.59□□□□□ -0.71
SRP54-206ENST00000555317 ANKDD1AQ495B1 522 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 ZNF672Q499Z4 452 aaPredicted RBP10.59□□□□□ -0.71
SRP54-206ENST00000555317 SEZ6L2Q6UXD5 910 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 ZNF813Q6ZN06 617 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 FAM86B1Q8N7N1 296 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 ZNF611Q8N823 705 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 OR52J3Q8NH60 311 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 OR51A7Q8NH64 312 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 MAGEE2Q8TD90 523 aaPredicted RBP10.59□□□□□ -0.71
SRP54-206ENST00000555317 LIPHQ8WWY8 451 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 BCL2L2Q92843 193 aaPredicted RBP10.59□□□□□ -0.71
SRP54-206ENST00000555317 POP5Q969H6 163 aaKnown RBP10.59□□□□□ -0.71
SRP54-206ENST00000555317 CCDC124Q96CT7 223 aaKnown RBP10.59□□□□□ -0.71
SRP54-206ENST00000555317 TRIM15Q9C019 465 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms