RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ARHGEF28Q8N1W1 1705 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 GLCEO94923 617 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OSMP13725 252 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF425Q6IV72 752 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 HSD11B1LQ7Z5J1 315 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR51A4Q8NGJ6 313 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR51A2Q8NGJ7 313 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR1N1Q8NGS0 311 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR10J5Q8NHC4 309 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 POFUT1Q9H488 388 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SIT1Q9Y3P8 196 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 M0QYG6 137 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 KCNK2O95069 426 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 DNAJB1P25685 340 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 EIF2DP41214 584 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 RAB7AP51149 207 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 GLYR1Q49A26 553 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SLC39A5Q6ZMH5 540 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 CISD2Q8N5K1 135 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 C4orf32Q8N8J7 132 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ENDOVQ8N8Q3 282 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM178AQ8NBL3 297 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 GPR32P1Q8NGA4 272 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 LRFN3Q9BTN0 628 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SARGQ9BW04 601 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SALL4Q9UJQ4 1053 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 PPP2CAP67775 309 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 HTRA3P83110 453 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 HSF5Q4G112 596 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR4F5Q8NH21 305 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 KIRREL1Q96J84 757 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR4F4Q96R69 305 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SRRQ9GZT4 340 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 LHPPQ9H008 270 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR51E2Q9H255 320 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 PGAP2Q9UHJ9 254 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 HPNP05981 417 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 BMI1P35226 326 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SOHLH1Q5JUK2 328 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 PLXDC2Q6UX71 529 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR4F15Q8NGB8 312 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 APH1BQ8WW43 257 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ADGRB1O14514 1584 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ANTXRLA6NF34 631 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF814B7Z6K7 855 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 BTN1A1Q13410 526 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 DOC2BQ14184 412 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 VRK2Q86Y07 508 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM123Q8N131 208 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 MTMR14Q8NCE2 650 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR13J1Q8NGT2 312 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SLC7A13Q8TCU3 470 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 WASH6PQ9NQA3 447 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 EXO1Q9UQ84 846 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF281Q9Y2X9 895 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ANKRD61A6NGH8 418 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 H0YGG7 62 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 HBE1P02100 147 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 CALCBP10092 127 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 FGF3P11487 239 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF90Q03938 601 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 CEACAM7Q14002 265 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 TAZQ16635 292 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 SLC24A4Q8NFF2 622 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR56B1Q8NGI3 324 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 OR52E1Q8NGJ3 308 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 C11orf40Q8WZ69 217 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 EDEM2Q9BV94 578 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ZCCHC4Q9H5U6 513 aa6.39□□□□□ -1.39
SYNE2-216ENST00000555002 HINT3Q9NQE9 182 aaKnown RBP6.39□□□□□ -1.39
SYNE2-216ENST00000555002 ADGRB2O60241 1585 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 PLSCR1O15162 318 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 RNF224P0DH78 156 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 HTN1P15515 57 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 MMP12P39900 470 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CYP1B1Q16678 543 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 C17orf107Q6ZR85 190 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ADGRG5Q8IZF4 528 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 MDGA1Q8NFP4 955 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 OR7G3Q8NG95 312 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 DVL3Q92997 716 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 NXPE3Q969Y0 559 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 OR7D2Q96RA2 312 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ST6GALNAC4Q9H4F1 302 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ACOXLQ9NUZ1 547 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 MMACHCQ9Y4U1 282 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SMLR1H3BR10 107 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 RFPL3O75679 317 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 UTS2O95399 124 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 AREGP15514 252 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SUOXP51687 545 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CASP7P55210 303 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 OPN5Q6U736 354 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 NOXA1Q86UR1 476 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM200AQ86VY9 491 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SLC15A4Q8N697 577 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 RAB6CQ9H0N0 254 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ASIC5Q9NY37 505 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 KIAA2026Q5HYC2 2103 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CNOT1A5YKK6 2376 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms