RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 HSD17B2P37059 387 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 VHLP40337 213 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 ATP5OP48047 213 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 NPBWR2P48146 333 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 RORCP51449 518 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 ACLYP53396 1101 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 FBXW4P57775 412 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 PSG7Q13046 419 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 DAZ2Q13117 558 aaKnown RBP2.13□□□□□ -2.07
SCFD1-213ENST00000554776 FZD2Q14332 565 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 KIAA0087Q14695 138 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 CYTH1Q15438 398 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 VPS26BQ4G0F5 336 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 SOHLH1Q5JUK2 328 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 LY6G6FQ5SQ64 297 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 CARD17Q5XLA6 110 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 ACP7Q6ZNF0 438 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 LHFPL3Q86UP9 236 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 GTPBP8Q8N3Z3 284 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF557Q8N988 423 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-213ENST00000554776 SUMF2Q8NBJ7 301 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 OR1S2Q8NGQ3 325 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 ACOT11Q8WXI4 607 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-213ENST00000554776 FGF14Q92915 247 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 UCN3Q969E3 161 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 MFFQ9GZY8 342 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 CWH43Q9H720 699 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 DAZ3Q9NR90 486 aaKnown RBP2.13□□□□□ -2.07
SCFD1-213ENST00000554776 CCL28Q9NRJ3 127 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 NYAP2Q9P242 653 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 LSM7Q9UK45 103 aaKnown RBP2.13□□□□□ -2.07
SCFD1-213ENST00000554776 NUP50Q9UKX7 468 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 NEUROG3Q9Y4Z2 214 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 HEBP2Q9Y5Z4 205 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 CNTNAP1P78357 1384 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 C12orf71A8MTZ7 269 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ERVV-1B6SEH8 477 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 KRTAP4-16G5E9R7 235 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 RAB29O14966 203 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 KLHL41O60662 606 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 TSPAN13O95857 204 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 INSP01308 110 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 FTH1P02794 183 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 FGF1P05230 155 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF24P17028 368 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF43P17038 809 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ELK1P19419 428 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 TCN1P20061 433 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 CNR1P21554 472 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 GPR6P46095 362 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 YAP1P46937 504 aaKnown RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 NUP107P57740 925 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 GPX6P59796 221 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ACTA2P62736 377 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ERVK-25P63136 954 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ACTG2P63267 376 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ACTC1P68032 377 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ACTA1P68133 377 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 MRPS22P82650 360 aaKnown RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 Q6ZSR3 168 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 SLC25A48Q6ZT89 311 aaKnown RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 LINC00173Q6ZV60 143 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ZADH2Q8N4Q0 377 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 EID2Q8N6I1 236 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 OR5B3Q8NH48 314 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ACMSDQ8TDX5 336 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 SDR42E1Q8WUS8 393 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 TMEM158Q8WZ71 300 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 ELMO1Q92556 727 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 SGK3Q96BR1 496 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 CCDC126Q96EE4 140 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 RIOK2Q9BVS4 552 aaKnown RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 OR11A1Q9GZK7 315 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 UGT1A7Q9HAW7 530 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 UGT1A10Q9HAW8 530 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 UGT1A8Q9HAW9 530 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 NEK6Q9HC98 313 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 MRPL47Q9HD33 250 aaKnown RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 FGF20Q9NP95 211 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-213ENST00000554776 SLCO1B3Q9NPD5 702 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 IL26Q9NPH9 171 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 RAB20Q9NX57 234 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 DEC1Q9P2X7 70 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 KIAA1257Q9ULG3 409 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 TRAPPC4Q9Y296 219 aa2.12□□□□□ -2.07
SCFD1-213ENST00000554776 NINLQ9Y2I6 1382 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 COL16A1Q07092 1604 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 A0A075B6Q4 140 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 A0A0G2JN53 185 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 SERTM2A0A1B0GWG4 89 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 CIB4A0PJX0 185 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 CCDC182A6NF36 153 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 F6UB75 175 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 PANO1I0J062 215 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 CLOCKO15516 846 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 MGRN1O60291 552 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF861PO60384 105 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 AGTP01019 485 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 IGLV1-47P01700 117 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms