RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 NAA50Q9GZZ1 169 aaKnown RBP11.1□□□□□ -0.63
SHMT2-214ENST00000554604 ENPP5Q9UJA9 477 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 ICAM5Q9UMF0 924 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 EMC9Q9Y3B6 208 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 ROS1P08922 2347 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CDHR4A6H8M9 788 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 SERINC4A6NH21 518 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 GJE1A6NN92 205 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 H3BN98 237 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 OIP5O43482 229 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 FRS3O43559 492 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CXCL13O43927 109 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 EIF4E2O60573 245 aaKnown RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 GABARAPO95166 117 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 FADS2O95864 444 aaKnown RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CSTAP01040 98 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 ADH6P28332 368 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 MAP2K4P45985 399 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 OMPP47874 163 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CARD18P57730 90 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CDK5Q00535 292 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 FOXF1Q12946 379 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 FOXD4Q12950 439 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CBFBQ13951 182 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 IRF3Q14653 427 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 MAPK14Q16539 360 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 OCLNQ16625 522 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 NDUFAF6Q330K2 333 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 SLC25A30Q5SVS4 291 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CASP12Q6UXS9 341 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 ZNF730Q6ZMV8 503 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 RASSF6Q6ZTQ3 369 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 MBOAT2Q6ZWT7 520 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 FAM214BQ7L5A3 538 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 RRM2BQ7LG56 351 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CDC20BQ86Y33 519 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 OR5W2Q8NH69 310 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 POC1BQ8TC44 478 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 GPR119Q8TDV5 335 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 OSTF1Q92882 214 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 SLC35B4Q969S0 331 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 SLC41A3Q96GZ6 507 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 KLHL15Q96M94 604 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 KLHDC3Q9BQ90 382 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 OPN3Q9H1Y3 402 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 KRCC1Q9NPI7 259 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 TIGARQ9NQ88 270 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 CTPS2Q9NRF8 586 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 TESQ9UGI8 421 aaKnown RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 WARS2Q9UGM6 360 aaKnown RBP11.09□□□□□ -0.63
SHMT2-214ENST00000554604 KCNE5Q9UJ90 142 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 PROCRQ9UNN8 238 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 PRR14LQ5THK1 2151 aa11.09□□□□□ -0.63
SHMT2-214ENST00000554604 AKAP9Q99996 3911 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 A0A0J9YW62 118 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 CENPVL1A0A0U1RR11 272 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 FAM221AA4D161 298 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 TRAPPC13A5PLN9 417 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 KLF4O43474 513 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 GOSR1O95249 250 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 SOX14O95416 240 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 CD8BP10966 210 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 PRKCAP17252 672 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 FPR3P25089 353 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 CD79BP40259 229 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 SLC15A1P46059 708 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 SLC6A8P48029 635 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 ART1P52961 327 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 FAM27E3Q08E93 113 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF141Q15928 474 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 MEDAGQ5VYS4 303 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 RNF113BQ8IZP6 322 aaKnown RBP11.08□□□□□ -0.64
SHMT2-214ENST00000554604 STX19Q8N4C7 294 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 CLDN22Q8N7P3 220 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 ATP6V1C2Q8NEY4 427 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 OIT3Q8WWZ8 545 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 GMPPAQ96IJ6 420 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-214ENST00000554604 ADGRG7Q96K78 797 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 MRGPRX4Q96LA9 322 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 MED18Q9BUE0 208 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 PRR14Q9BWN1 585 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 CDCA4Q9BXL8 241 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 GLRX2Q9NS18 164 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 ELOVL5Q9NYP7 299 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 CLEC4AQ9UMR7 237 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 ARID1AO14497 2285 aa11.08□□□□□ -0.64
SHMT2-214ENST00000554604 MTORP42345 2549 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 A0A1W2PPW3 197 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 CLDN24A6NM45 220 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 THY1P04216 161 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 IGFBP1P08833 259 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-214ENST00000554604 IL11P20809 199 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 DNASE1P24855 282 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 GIPRP48546 466 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 NUDT6P53370 316 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms