RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 FASP25445 335 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 TACR3P29371 465 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 MAGEA5P43359 124 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ZNF41P51814 821 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 POLR2HP52434 150 aaKnown RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 COPZ1P61923 177 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 PLGLB1Q02325 96 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ST3GAL3Q11203 375 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 MERTKQ12866 999 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 FOXD4Q12950 439 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 PPP1R8Q12972 351 aaKnown RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 RIPK1Q13546 671 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 DGCR6Q14129 220 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 TRAM2Q15035 370 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 SEC23BQ15437 767 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 GLYR1Q49A26 553 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ALG10BQ5I7T1 473 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 COLEC12Q5KU26 742 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 PODNL1Q6PEZ8 512 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ULK3Q6PHR2 472 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 GRINAQ7Z429 371 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 YRDCQ86U90 279 aaKnown RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 CYP4Z1Q86W10 505 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ADGRG3Q86Y34 549 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 EPHX4Q8IUS5 362 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 SIAH3Q8IW03 269 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 IZUMO1Q8IYV9 350 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 HS3ST5Q8IZT8 346 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 GTPBP8Q8N3Z3 284 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 FAM98AQ8NCA5 519 aaKnown RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 OR52J3Q8NH60 311 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 SLC7A13Q8TCU3 470 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 DNAJA4Q8WW22 397 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 IPCEF1Q8WWN9 437 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 TMEM234Q8WY98 164 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 NR4A3Q92570 626 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 SLC38A4Q969I6 547 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 CENPNQ96H22 339 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 EPYCQ99645 322 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 BARD1Q99728 777 aaKnown RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ZNF426Q9BUY5 554 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 SEMA6AQ9H2E6 1030 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 PTGES2Q9H7Z7 377 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 DCLRE1BQ9H816 532 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ZDHHC11Q9H8X9 412 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 RNPEPL1Q9HAU8 725 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 C12orf10Q9HB07 376 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 QPCTLQ9NXS2 382 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 LUZP4Q9P127 313 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 STX18Q9P2W9 335 aaKnown RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 RPS6KB2Q9UBS0 482 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 DKKL1Q9UK85 242 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 RPH3AQ9Y2J0 694 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 TMED7Q9Y3B3 224 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 LIPGQ9Y5X9 500 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 LYVE1Q9Y5Y7 322 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ALPK2Q86TB3 2170 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 KIAA1549Q9HCM3 1950 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 SHANK1Q9Y566 2161 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 COL6A6A6NMZ7 2263 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 RP1L1Q8IWN7 2480 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-212ENST00000554486 A0A087WUJ7 227 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 A0A087WUU8 490 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 SH3PXD2BA1X283 911 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 OR2M5A3KFT3 312 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 TNFRSF11BO00300 401 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 PIP5K1CO60331 668 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 NPIPB7O75200 414 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 TRAPPC6AO75865 159 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 INMTO95050 263 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 ATP6V1G2O95670 118 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 HPNP05981 417 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 PNMTP11086 282 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 UQCRBP14927 111 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 ZNF17P17021 662 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 CCNA2P20248 432 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 SHC1P29353 583 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 APOBEC1P41238 236 aaKnown RBP5.63□□□□□ -1.51
SCFD1-212ENST00000554486 EIF1P41567 113 aaKnown RBP5.63□□□□□ -1.51
SCFD1-212ENST00000554486 UGT2B15P54855 530 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 SMIM11AP58511 58 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 COL10A1Q03692 680 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 EGR4Q05215 589 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 LY6DQ14210 128 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 SLC10A1Q14973 349 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 TOMM20Q15388 145 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 INAQ16352 499 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 EXOC3L2Q2M3D2 409 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 CMPK2Q5EBM0 449 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 FGD3Q5JSP0 725 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 ZNF324BQ6AW86 544 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-212ENST00000554486 ZNF770Q6IQ21 691 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-212ENST00000554486 SHQ1Q6PI26 577 aaKnown RBP5.63□□□□□ -1.51
SCFD1-212ENST00000554486 TBPL2Q6SJ96 375 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 TRILQ7L0X0 811 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 PEG10Q86TG7 708 aaKnown RBP5.63□□□□□ -1.51
SCFD1-212ENST00000554486 SLC22A16Q86VW1 577 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 MEX3DQ86XN8 651 aaKnown RBP5.63□□□□□ -1.51
SCFD1-212ENST00000554486 P3H2Q8IVL5 708 aa5.63□□□□□ -1.51
SCFD1-212ENST00000554486 SPARTQ8N0X7 666 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms