RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 HSDL1Q3SXM5 330 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 C1orf220Q5T0J3 134 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 PTRHD1Q6GMV3 140 aaKnown RBP3.65□□□□□ -1.83
SCFD1-211ENST00000554437 C22orf42Q6IC83 251 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 ULK3Q6PHR2 472 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 LRRC74BQ6ZQY2 392 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 NUDCD3Q8IVD9 361 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 C8orf31Q8N9H6 132 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 OR52I1Q8NGK6 324 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 CCDC26Q8TAB7 109 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 GPR151Q8TDV0 419 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 NAT6Q93015 286 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 CCDC124Q96CT7 223 aaKnown RBP3.65□□□□□ -1.83
SCFD1-211ENST00000554437 CXorf40BQ96DE9 158 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 B3GALT6Q96L58 329 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 JSRP1Q96MG2 331 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-211ENST00000554437 NIPSNAP3BQ9BS92 247 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 ELOVL4Q9GZR5 314 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 PPA2Q9H2U2 334 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 GOLPH3Q9H4A6 298 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 MIEF1Q9NQG6 463 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 ADA2Q9NZK5 511 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 ENPP5Q9UJA9 477 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 OARD1Q9Y530 152 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 GMPPBQ9Y5P6 360 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 KPTNQ9Y664 436 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 USP47Q96K76 1375 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF99A8MXY4 864 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 AIM2O14862 343 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 SIVA1O15304 175 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 GLAP06280 429 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 H2AFZP0C0S5 128 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF19P17023 458 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 DCKP27707 260 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 S100A5P33763 92 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 NPBWR2P48146 333 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 ALDH3B2P48448 385 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 MRPL19P49406 292 aaKnown RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 STK19P49842 368 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 HLCSP50747 726 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 LCN2P80188 198 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 RAB40BQ12829 278 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 SELENBP1Q13228 472 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 IL18R1Q13478 541 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 VGLL4Q14135 290 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 KIAA0040Q15053 153 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 RAB35Q15286 201 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 C18orf21Q32NC0 220 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 CCDC65Q8IXS2 484 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 PRR22Q8IZ63 422 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 MCOLN2Q8IZK6 566 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 KRT222Q8N1A0 295 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 LINC01561Q8N1V8 128 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 ARHGAP18Q8N392 663 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 OR4D9Q8NGE8 314 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 OR4D6Q8NGJ1 314 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 CA5BP1Q8WTZ4 195 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 TNFRSF14Q92956 283 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 FAF2Q96CS3 445 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 VSIG2Q96IQ7 327 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF641Q96N77 438 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 OPALINQ96PE5 141 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 ZIM3Q96PE6 472 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 CSPG4P5Q96PW8 444 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 OPN3Q9H1Y3 402 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 NHEJ1Q9H9Q4 299 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 DMAP1Q9NPF5 467 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 SDHAF3Q9NRP4 125 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 GPATCH2LQ9NWQ4 482 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 SLC2A6Q9UGQ3 507 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF229Q9UJW7 825 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 MOKQ9UQ07 419 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 SCML2Q9UQR0 700 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 GRIN2DO15399 1336 aa3.64□□□□□ -1.83
SCFD1-211ENST00000554437 CFAP65Q6ZU64 1925 aaKnown RBP3.64□□□□□ -1.83
SCFD1-211ENST00000554437 LRRIQ3A6PVS8 624 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 M0R3G1 203 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 SLC17A2O00624 439 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 RAB29O14966 203 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 SCAMP2O15127 329 aaKnown RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 CHST1O43916 411 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 NDUFS6O75380 124 aaKnown RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 LCA5LO95447 670 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 JCHAINP01591 159 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 SDC1P18827 310 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 BCKDHBP21953 392 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 IL32P24001 234 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 IL12BP29460 328 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 RPL4P36578 427 aaKnown RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 ACVR1BP36896 505 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 GNPDA1P46926 289 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 HAAOP46952 286 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 RGRP47804 291 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 CX3CR1P49238 355 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 ERVPABLB-1P60509 514 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 PLOD1Q02809 727 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 PUDPQ08623 228 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 GRB7Q14451 532 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 TMEM52BQ4KMG9 183 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms