RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 SOX14O95416 240 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 CLDN14O95500 239 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 BAG2O95816 211 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 TXNDC12O95881 172 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 RPL27P61353 136 aaKnown RBP16.28■□□□□ 0.2
PSEN1-210ENST00000554131 ERVK-25P63136 954 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 TAF11Q15544 211 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 PHYHD1Q5SRE7 291 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 DPY19L2P2Q6ZN68 376 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 LINGO2Q7L985 606 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 GABRG1Q8N1C3 465 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 PARP8Q8N3A8 854 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 CA5BP1Q8WTZ4 195 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 DNAJC9Q8WXX5 260 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 APH1AQ96BI3 265 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 MRPL13Q9BYD1 178 aaKnown RBP16.28■□□□□ 0.2
PSEN1-210ENST00000554131 SLC7A10Q9NS82 523 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 STX18Q9P2W9 335 aaKnown RBP16.28■□□□□ 0.2
PSEN1-210ENST00000554131 MALT1Q9UDY8 824 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 DOPEY1Q5JWR5 2465 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 HCFC1P51610 2035 aa16.28■□□□□ 0.2
PSEN1-210ENST00000554131 EEF1E1-BLOC1S5C9J1V9 151 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 BHLHE40O14503 412 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 SOCS2O14508 198 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 EEF1E1O43324 174 aaKnown RBP16.27■□□□□ 0.2
PSEN1-210ENST00000554131 MGRN1O60291 552 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 MITFO75030 526 aaPredicted RBP16.27■□□□□ 0.2
PSEN1-210ENST00000554131 UPK3AO75631 287 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 BCL10O95999 233 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 PGA4P0DJD7 388 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 PGA3P0DJD8 388 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 OSMP13725 252 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 APEHP13798 732 aaKnown RBP16.27■□□□□ 0.2
PSEN1-210ENST00000554131 ASCL1P50553 236 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 DAP3P51398 398 aaKnown RBP16.27■□□□□ 0.2
PSEN1-210ENST00000554131 HIST3H3Q16695 136 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 SLC36A3Q495N2 470 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 RPL13AP3Q6NVV1 102 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 LUZP2Q86TE4 346 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 C20orf196Q8IYI0 205 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 ZNF100Q8IYN0 542 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 HDAC2Q92769 488 aaKnown RBP16.27■□□□□ 0.2
PSEN1-210ENST00000554131 TMEM54Q969K7 222 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 NMD3Q96D46 503 aaKnown RBP16.27■□□□□ 0.2
PSEN1-210ENST00000554131 Q96M85 177 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 ADAD1Q96M93 576 aaKnown RBP16.27■□□□□ 0.2
PSEN1-210ENST00000554131 POLDIP3Q9BY77 421 aaKnown RBP16.27■□□□□ 0.2
PSEN1-210ENST00000554131 LINC00470Q9BZP3 86 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 SLCO5A1Q9H2Y9 848 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 DCLRE1BQ9H816 532 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 USE1Q9NZ43 259 aa16.27■□□□□ 0.2
PSEN1-210ENST00000554131 EI24O14681 340 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 ARPC3O15145 178 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 TRMUO75648 421 aaKnown RBP16.26■□□□□ 0.19
PSEN1-210ENST00000554131 CNOT4O95628 575 aaKnown RBP16.26■□□□□ 0.19
PSEN1-210ENST00000554131 PPP1R3DO95685 299 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 IGHV3-9P01782 118 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 ALPLP05186 524 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 SLC6A6P31641 620 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 RPL4P36578 427 aaKnown RBP16.26■□□□□ 0.19
PSEN1-210ENST00000554131 FOXG1P55316 489 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-210ENST00000554131 TOP3AQ13472 1001 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-210ENST00000554131 CAMK2DQ13557 499 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 MESTQ5EB52 335 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 FBXW9Q5XUX1 488 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 Q6ZT83 130 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 ARIH2OSQ8N7S6 290 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 OR4Q3Q8NH05 313 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 SLC25A44Q96H78 314 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-210ENST00000554131 LRR1Q96L50 414 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 KCNK17Q96T54 332 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 SLC29A1Q99808 456 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 ZNF556Q9HAH1 456 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 PAPOLBQ9NRJ5 636 aaKnown RBP16.26■□□□□ 0.19
PSEN1-210ENST00000554131 POFUT2Q9Y2G5 429 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 IER3IP1Q9Y5U9 82 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 ALPK2Q86TB3 2170 aa16.26■□□□□ 0.19
PSEN1-210ENST00000554131 IMPA2O14732 288 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 CASQ2O14958 399 aaPredicted RBP16.25■□□□□ 0.19
PSEN1-210ENST00000554131 AKAP8O43823 692 aaKnown RBP16.25■□□□□ 0.19
PSEN1-210ENST00000554131 SLC43A1O75387 559 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 ACADSP16219 412 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 COX5AP20674 150 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 GRNP28799 593 aaKnown RBP16.25■□□□□ 0.19
PSEN1-210ENST00000554131 SDHAP31040 664 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 PCYT1AP49585 367 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 DAG1Q14118 895 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 CLEC12AQ5QGZ9 265 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 CARD17Q5XLA6 110 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 CBR4Q8N4T8 237 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 MAGEE2Q8TD90 523 aaPredicted RBP16.25■□□□□ 0.19
PSEN1-210ENST00000554131 RASD2Q96D21 266 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 RBM4BQ9BQ04 359 aaKnown RBP16.25■□□□□ 0.19
PSEN1-210ENST00000554131 RBM4Q9BWF3 364 aaKnown RBP16.25■□□□□ 0.19
PSEN1-210ENST00000554131 TSSK6Q9BXA6 273 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 RNPEPL1Q9HAU8 725 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 NPDC1Q9NQX5 325 aaPredicted RBP16.25■□□□□ 0.19
PSEN1-210ENST00000554131 KRT84Q9NSB2 600 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 GALNT8Q9NY28 637 aa16.25■□□□□ 0.19
PSEN1-210ENST00000554131 KIF17Q9P2E2 1029 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms