RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MCIDASD6RGH6 385 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 C11orf98E9PRG8 122 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 BLOC1S5-TXNDC5H3BN57 136 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 RAMP1O60894 148 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 RAD51DO75771 328 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 BGLAPP02818 100 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 MT-ND1P03886 318 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 HSD17B1P14061 328 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 IFNGR1P15260 489 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 CDH2P19022 906 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 PTNP21246 168 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 IGHV1-2P23083 117 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 MPGP29372 298 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 GATA4P43694 442 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 YAP1P46937 504 aaKnown RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 UBE2NP61088 152 aaKnown RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 POU3F1Q03052 451 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 KEAP1Q14145 624 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 ZNF74Q16587 644 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 TIMM23BQ5SRD1 257 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 C1QTNF12Q5T7M4 302 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 TSPO2Q5TGU0 170 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 ZNF730Q6ZMV8 503 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 TRPM8Q7Z2W7 1104 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 VTCN1Q7Z7D3 282 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 CDC20BQ86Y33 519 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 KDM8Q8N371 416 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 MFSD4AQ8N468 514 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 C17orf78Q8N4C9 275 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 C1orf162Q8NEQ5 155 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 OR4D11Q8NGI4 311 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 OR6N1Q8NGY5 312 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 ZNF385AQ96PM9 386 aaKnown RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 WFDC6Q9BQY6 131 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 TRIM15Q9C019 465 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 MUC13Q9H3R2 512 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 GORASP2Q9H8Y8 452 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 MOV10Q9HCE1 1003 aaKnown RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 SLC7A10Q9NS82 523 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 DCAF13Q9NV06 445 aaKnown RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 FAM53CQ9NYF3 392 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 STX18Q9P2W9 335 aaKnown RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 TMEFF2Q9UIK5 374 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 AMDHD2Q9Y303 409 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 SNX13Q9Y5W8 968 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 HEATR5AQ86XA9 2040 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 NBPF19A0A087WUL8 3843 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 OR5H1A6NKK0 313 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 PLPP3O14495 311 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 OR7A10O76100 309 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 BCL10O95999 233 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 IGF2P01344 180 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 HRGP04196 525 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 H1F0P07305 194 aaKnown RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 SAGP10523 405 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 NR2C1P13056 603 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 IFI30P13284 250 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 RHCEP18577 417 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 FUT1P19526 365 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 COX5AP20674 150 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 CCKARP32238 428 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 SELENOPP49908 381 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 RASSF2P50749 326 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 DAP3P51398 398 aaKnown RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 CRYBA2P53672 197 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 SH3BGRP55822 239 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 PRPS1P60891 318 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 TSC22D1Q15714 1073 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 TAB1Q15750 504 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 DNAL1Q4LDG9 190 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 MTX3Q5HYI7 312 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 FGD3Q5JSP0 725 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 C9orf135Q5VTT2 229 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 TMEM108Q6UXF1 575 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 PXKQ7Z7A4 578 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 EPHX4Q8IUS5 362 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 NKAIN4Q8IVV8 208 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 RNF113BQ8IZP6 322 aaKnown RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 OFCC1Q8IZS5 231 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 ZNF433Q8N7K0 673 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 FAM156AQ8NDB6 213 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 RBM15BQ8NDT2 890 aaKnown RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 OR52N5Q8NH56 324 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 TMEM255BQ8WV15 326 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 PYURFQ96I23 114 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 ADAD1Q96M93 576 aaKnown RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 KCNS3Q9BQ31 491 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 RSPO3Q9BXY4 272 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 LINC00470Q9BZP3 86 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 AMBRA1Q9C0C7 1298 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 ANKRD19PQ9H560 264 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 UBTD1Q9HAC8 227 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 OBP2BQ9NPH6 170 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 PRPF19Q9UMS4 504 aaKnown RBP7.34□□□□□ -1.23
PSEN1-209ENST00000553855 MGAT4BQ9UQ53 548 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 TMEM5Q9Y2B1 443 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 POFUT2Q9Y2G5 429 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 ENPP4Q9Y6X5 453 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 V9GYQ6 96 aa7.34□□□□□ -1.23
PSEN1-209ENST00000553855 INTS1Q8N201 2190 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms