RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PLA2G12AQ9BZM1 189 aa14.35□□□□□ -0.11
ACTN1-209ENST00000553659 NDEL1Q9GZM8 345 aa14.35□□□□□ -0.11
ACTN1-209ENST00000553659 NAA50Q9GZZ1 169 aaKnown RBP14.35□□□□□ -0.11
ACTN1-209ENST00000553659 OR52D1Q9H346 318 aa14.35□□□□□ -0.11
ACTN1-209ENST00000553659 DSN1Q9H410 356 aa14.35□□□□□ -0.11
ACTN1-209ENST00000553659 CALHM2Q9HA72 323 aa14.35□□□□□ -0.11
ACTN1-209ENST00000553659 DNAJC27Q9NZQ0 273 aa14.35□□□□□ -0.11
ACTN1-209ENST00000553659 SLC6A5Q9Y345 797 aa14.35□□□□□ -0.11
ACTN1-209ENST00000553659 EXOSC1Q9Y3B2 195 aaKnown RBP14.35□□□□□ -0.11
ACTN1-209ENST00000553659 MAP1AP78559 2803 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-209ENST00000553659 NIPBLQ6KC79 2804 aaeCLIP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 HRNRQ86YZ3 2850 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 MBD3L4A6NDZ8 208 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 MBD3L3A6NE82 208 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 MBD3L5A6NJ08 208 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 MYL12BO14950 172 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 PIP5K1CO60331 668 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 GOSR1O95249 250 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 IL18BPO95998 194 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 LCKP06239 509 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 MYL12AP19105 171 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 OPRM1P35372 400 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 CASP3P42574 277 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 PNLIPRP2P54317 469 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 NRG3P56975 720 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 TUBA1BP68363 451 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 SORDQ00796 357 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 PLAURQ03405 335 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 CTF1Q16619 201 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 NXNL2Q5VZ03 156 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 SMARCD3Q6STE5 483 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 LINC00114Q6XXX2 140 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 TUBA1AQ71U36 451 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 SLC46A3Q7Z3Q1 461 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 MISPQ8IVT2 679 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 ANKK1Q8NFD2 765 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 OR8D4Q8NGM9 314 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 OR9Q1Q8NGQ5 310 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 MBD3L2Q8NHZ7 208 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 LINC01560Q8TB33 94 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 NTNG2Q96CW9 530 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 WDYHV1Q96HA8 205 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 TMEM41AQ96HV5 264 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 TRIB1Q96RU8 372 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 NXF5Q9H1B4 397 aaKnown RBP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 PLEKHF2Q9H8W4 249 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 HHATLQ9HCP6 504 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 FGF20Q9NP95 211 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 JKAMPQ9P055 326 aa14.34□□□□□ -0.11
ACTN1-209ENST00000553659 H2AFY2Q9P0M6 372 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-209ENST00000553659 A0A087WUJ7 227 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 M0R129 80 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 GTPBP1O00178 669 aaKnown RBP14.33□□□□□ -0.12
ACTN1-209ENST00000553659 ZNF264O43296 627 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 EIF4E2O60573 245 aaKnown RBP14.33□□□□□ -0.12
ACTN1-209ENST00000553659 UTS2O95399 124 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 SAGP10523 405 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-209ENST00000553659 SLC6A6P31641 620 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 UGT2B10P36537 528 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 AGFG1P52594 562 aaKnown RBP14.33□□□□□ -0.12
ACTN1-209ENST00000553659 LSM11P83369 360 aaKnown RBP eCLIP14.33□□□□□ -0.12
ACTN1-209ENST00000553659 PLCXD2Q0VAA5 305 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 EFR3AQ14156 821 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 TOMM20Q15388 145 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 DGUOKQ16854 277 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 ANKDD1AQ495B1 522 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 ARMCX4Q5H9R4 360 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 NUP54Q7Z3B4 507 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 BIVMQ86UB2 503 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 LNX2Q8N448 690 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 OR4C3Q8NH37 302 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 ABTB1Q969K4 478 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-209ENST00000553659 LAT2Q9GZY6 243 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 ISYNA1Q9NPH2 558 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 FLRT3Q9NZU0 649 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 ICAM5Q9UMF0 924 aa14.33□□□□□ -0.12
ACTN1-209ENST00000553659 CCRL2O00421 344 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 PTHP01270 115 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 IFNGP01579 166 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 HTR1FP30939 366 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 HOXC12P31275 282 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 TGFBR2P37173 567 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 MTNR1AP48039 350 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 CLK1P49759 484 aaKnown RBP14.32□□□□□ -0.12
ACTN1-209ENST00000553659 CDH11P55287 796 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 NNATQ16517 81 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 WIPI1Q5MNZ9 446 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-209ENST00000553659 CLEC12AQ5QGZ9 265 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 AADACL4Q5VUY2 407 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 TIGD3Q6B0B8 471 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 SLC30A6Q6NXT4 461 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 WDR88Q6ZMY6 472 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 GDPGP1Q6ZNW5 385 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 CROCCP3Q8IVE0 287 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 CADM2Q8N3J6 435 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 WFDC11Q8NEX6 87 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 KBTBD8Q8NFY9 601 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 OR4Q3Q8NH05 313 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 PFN4Q8NHR9 129 aa14.32□□□□□ -0.12
ACTN1-209ENST00000553659 ZPLD1Q8TCW7 415 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms