RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ADORA3P0DMS8 318 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 CBR1P16152 277 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 PAX7P23759 505 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 NPRL3Q12980 569 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 SWI5Q1ZZU3 235 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 CCDC80Q76M96 950 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 PXKQ7Z7A4 578 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 MDP1Q86V88 176 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 MYPOPQ86VE0 399 aaPredicted RBP13.81□□□□□ -0.2
CDK4-215ENST00000553237 OR10H5Q8NGA6 315 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 OR6N1Q8NGY5 312 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 OR5J2Q8NH18 312 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 ZNF583Q96ND8 569 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 CA10Q9NS85 328 aa13.81□□□□□ -0.2
CDK4-215ENST00000553237 ABCA1O95477 2261 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 ZNF99A8MXY4 864 aaPredicted RBP13.8□□□□□ -0.2
CDK4-215ENST00000553237 GPRIN2O60269 458 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 SHOX2O60902 331 aaPredicted RBP13.8□□□□□ -0.2
CDK4-215ENST00000553237 MT-ATP6P00846 226 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 IGKV3-15P01624 115 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 IFNGR1P15260 489 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 TNFRSF1BP20333 461 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 SERPINF1P36955 418 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 BIDP55957 195 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 DSCR9P59020 149 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 HGFACQ04756 655 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 ZNF74Q16587 644 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 C3orf36Q3SXR2 165 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 PIGWQ7Z7B1 504 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 PRIMA1Q86XR5 153 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 LRRC17Q8N6Y2 441 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 FAM169BQ8N8A8 192 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 LRR1Q96L50 414 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 ULBP2Q9BZM5 246 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 EFCAB1Q9HAE3 211 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 B3GAT2Q9NPZ5 323 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 CMTM6Q9NX76 183 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 POFUT2Q9Y2G5 429 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 SH3GLB1Q9Y371 365 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 SONP18583 2426 aaKnown RBP13.8□□□□□ -0.2
CDK4-215ENST00000553237 CR1P17927 2039 aa13.8□□□□□ -0.2
CDK4-215ENST00000553237 HLA-HP01893 362 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 OR4A8P0C604 315 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 CD79AP11912 226 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 EFNA4P52798 201 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 SNRPD2P62316 118 aaKnown RBP13.79□□□□□ -0.2
CDK4-215ENST00000553237 PIGFQ07326 219 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 ADIPOQQ15848 244 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 ERICH5Q6P6B1 374 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 ZNF813Q6ZN06 617 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 CARM1Q86X55 608 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 SLC15A3Q8IY34 581 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 OR4F15Q8NGB8 312 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 RASSF5Q8WWW0 418 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 NANOS1Q8WY41 292 aaKnown RBP13.79□□□□□ -0.2
CDK4-215ENST00000553237 FAM168AQ92567 244 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 PROX1Q92786 737 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 CMTM5Q96DZ9 223 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 VRK1Q99986 396 aaPredicted RBP13.79□□□□□ -0.2
CDK4-215ENST00000553237 PRSS27Q9BQR3 290 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 PCDHAC1Q9H158 963 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 MOV10Q9HCE1 1003 aaKnown RBP13.79□□□□□ -0.2
CDK4-215ENST00000553237 NANSQ9NR45 359 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 YAE1D1Q9NRH1 226 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 TAS2R5Q9NYW4 299 aa13.79□□□□□ -0.2
CDK4-215ENST00000553237 IGHV2OR16-5A0A0B4J2B6 119 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 KIAA1324LA8MWY0 1029 aaPredicted RBP13.78□□□□□ -0.2
CDK4-215ENST00000553237 FAM220BPB1ANY3 271 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 RNF13O43567 381 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 F12P00748 615 aaPredicted RBP13.78□□□□□ -0.2
CDK4-215ENST00000553237 HIST1H2ABP04908 130 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 UMPSP11172 480 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 THBS4P35443 961 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 ARR3P36575 388 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 CSNK1A1P48729 337 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 NUDT2P50583 147 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 DEF8Q6ZN54 512 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 SLC35D2Q76EJ3 337 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 HIST3H2AQ7L7L0 130 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 SLC46A3Q7Z3Q1 461 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 ARPINQ7Z6K5 226 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 CCDC36Q8IYA8 594 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 OR2T12Q8NG77 320 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 HIST1H2ACQ93077 130 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 MPP4Q96JB8 637 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 SORCS2Q96PQ0 1159 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 HOPXQ9BPY8 73 aaPredicted RBP13.78□□□□□ -0.2
CDK4-215ENST00000553237 NOX3Q9HBY0 568 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 GMPR2Q9P2T1 348 aaKnown RBP13.78□□□□□ -0.2
CDK4-215ENST00000553237 ARL2BPQ9Y2Y0 163 aa13.78□□□□□ -0.2
CDK4-215ENST00000553237 A0A096LNT2 108 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 B9A039 149 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 CD5LO43866 347 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 CRLF1O75462 422 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 B4GALT1P15291 398 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 PRDX6P30041 224 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 OR1E2P47887 323 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 SLC7A2P52569 658 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 TAS2R41P59536 307 aa13.77□□□□□ -0.21
CDK4-215ENST00000553237 LIPEQ05469 1076 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms