RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 OMPP47874 163 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 RPS4XP62701 263 aaKnown RBP12.4□□□□□ -0.42
PTCH1-226ENST00000553011 ROR2Q01974 943 aaKnown RBP12.4□□□□□ -0.42
PTCH1-226ENST00000553011 SEZ6L2Q6UXD5 910 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 TMPRSS11FQ6ZWK6 438 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 ABHD12BQ7Z5M8 362 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-226ENST00000553011 OAFQ86UD1 273 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 IGFN1Q86VF2 1251 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 SPATA24Q86W54 205 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 C20orf196Q8IYI0 205 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 CDK20Q8IZL9 346 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 GPR137CQ8N3F9 429 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 CANT1Q8WVQ1 401 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 HSD17B8Q92506 261 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 ZNF837Q96EG3 531 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-226ENST00000553011 MUS81Q96NY9 551 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 ALPK1Q96QP1 1244 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 POLDIP3Q9BY77 421 aaKnown RBP12.4□□□□□ -0.42
PTCH1-226ENST00000553011 CLEC4MQ9H2X3 399 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-226ENST00000553011 VNN3Q9NY84 501 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 AURKCQ9UQB9 309 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 TMEM5Q9Y2B1 443 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 LYVE1Q9Y5Y7 322 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 A0A1W2PPR1 153 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 A0A1W2PRG6 482 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 DHRS12A0PJE2 317 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 BCL10O95999 233 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 RAP2AP10114 183 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 LOXP28300 417 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-226ENST00000553011 LIMS1P48059 325 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 SLC9A3P48764 834 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 TGFBR3Q03167 851 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 PPP1R8Q12972 351 aaKnown RBP12.39□□□□□ -0.43
PTCH1-226ENST00000553011 PPA1Q15181 289 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 ACKR1Q16570 336 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 CEACAM16Q2WEN9 425 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 ALG10Q5BKT4 473 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 FBXW10Q5XX13 1052 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 HMBOX1Q6NT76 420 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 CCDC121Q6ZUS5 278 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 LRRC75AQ8NAA5 344 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 OR1K1Q8NGR3 316 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 OR6N1Q8NGY5 312 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 OR52N5Q8NH56 324 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 OR6X1Q8NH79 312 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 ASB10Q8WXI3 467 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 POP5Q969H6 163 aaKnown RBP12.39□□□□□ -0.43
PTCH1-226ENST00000553011 PIK3IP1Q96FE7 263 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 LURAP1Q96LR2 239 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 GPA33Q99795 319 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
PTCH1-226ENST00000553011 CRLF2Q9HC73 371 aa12.39□□□□□ -0.43
PTCH1-226ENST00000553011 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 TCRBV3S1A0A5B6 114 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 MCIDASD6RGH6 385 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 RPL36A-HNRNPH2H7BZ11 118 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 TNFRSF11BO00300 401 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 OR10H3O60404 316 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 ZNF26P17031 533 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 CSNK1A1P48729 337 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 CTXN1P60606 82 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 RUNX1T1Q06455 604 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 TOP3AQ13472 1001 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 ZBED5Q49AG3 693 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 HIKESHIQ53FT3 197 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 BEX5Q5H9J7 111 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 OR2T5Q6IEZ7 315 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 OR7E24Q6IFN5 339 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 ZER1Q7Z7L7 766 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 P2RY8Q86VZ1 359 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 CDC20BQ86Y33 519 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 WDR31Q8NA23 367 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 C1orf162Q8NEQ5 155 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 OR2T29Q8NH02 315 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 NRGNQ92686 78 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 TMEM54Q969K7 222 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 PLPPR2Q96GM1 343 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 SLC25A44Q96H78 314 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 LRR1Q96L50 414 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 ADAD1Q96M93 576 aaKnown RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 HS3ST6Q96QI5 342 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 CHID1Q9BWS9 393 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 ULBP2Q9BZM5 246 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 NELFAQ9H3P2 528 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 SLC17A5Q9NRA2 495 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 TMCC3Q9ULS5 477 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 SIGLEC7Q9Y286 467 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
PTCH1-226ENST00000553011 RAI1Q7Z5J4 1906 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-226ENST00000553011 ARID1AO14497 2285 aa12.37□□□□□ -0.43
PTCH1-226ENST00000553011 A0A096LPE4 126 aa12.37□□□□□ -0.43
PTCH1-226ENST00000553011 A0A1W2PPZ6 126 aa12.37□□□□□ -0.43
PTCH1-226ENST00000553011 UNC119BA6NIH7 251 aa12.37□□□□□ -0.43
PTCH1-226ENST00000553011 EBAG9O00559 213 aa12.37□□□□□ -0.43
PTCH1-226ENST00000553011 PTP4A3O75365 173 aa12.37□□□□□ -0.43
PTCH1-226ENST00000553011 TRMUO75648 421 aaKnown RBP12.37□□□□□ -0.43
PTCH1-226ENST00000553011 KRT36O76013 467 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms