RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PLK3Q9H4B4 646 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 C12orf10Q9HB07 376 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 CA10Q9NS85 328 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
CKAP4-202ENST00000552828 SH3GLB1Q9Y371 365 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 ARPC4-TTLL3A0A0A6YYG9 625 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 A0A1B0GWA3 101 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 OR6C65A6NJZ3 312 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 TPST2O60704 377 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 GMNNO75496 209 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 DNAJC8O75937 253 aaPredicted RBP10.29□□□□□ -0.76
CKAP4-202ENST00000552828 AKR7A3O95154 331 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 VAMP5O95183 116 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 HNF1AP20823 631 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 CALB2P22676 271 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 GIFP27352 417 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 PPOXP50336 477 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 SELENOWP63302 87 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 BNIP2Q12982 314 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 CEACAM7Q14002 265 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 ADIPOQQ15848 244 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 TBRG1Q3YBR2 411 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 ALG10BQ5I7T1 473 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 SAMD4BQ5PRF9 694 aaKnown RBP10.29□□□□□ -0.76
CKAP4-202ENST00000552828 ANKRD16Q6P6B7 361 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 TRPM8Q7Z2W7 1104 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 DEFB107AQ8IZN7 70 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 OR6T1Q8NGN1 323 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 OR1K1Q8NGR3 316 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 VANGL1Q8TAA9 524 aaPredicted RBP10.29□□□□□ -0.76
CKAP4-202ENST00000552828 RNF217Q8TC41 542 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 MAGEE2Q8TD90 523 aaPredicted RBP10.29□□□□□ -0.76
CKAP4-202ENST00000552828 STK35Q8TDR2 534 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 BCL2L2Q92843 193 aaPredicted RBP10.29□□□□□ -0.76
CKAP4-202ENST00000552828 SLC47A1Q96FL8 570 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 CDRT15Q96T59 188 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 WFDC6Q9BQY6 131 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 CHODLQ9H9P2 273 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 MOV10Q9HCE1 1003 aaKnown RBP10.29□□□□□ -0.76
CKAP4-202ENST00000552828 ADPRHL2Q9NX46 363 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 FBXO9Q9UK97 447 aaPredicted RBP10.29□□□□□ -0.76
CKAP4-202ENST00000552828 TENM1Q9UKZ4 2725 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 MALRD1Q5VYJ5 2156 aa10.29□□□□□ -0.76
CKAP4-202ENST00000552828 ARFGEF3Q5TH69 2177 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 A0A0B4J2E0 115 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 A0A1B0GX12 115 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 ZNF587BE7ETH6 402 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 TGFAP01135 160 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 IGLV1-44P01699 117 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 CRYAAP02489 173 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 OR4A8P0C604 315 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
CKAP4-202ENST00000552828 CDH2P19022 906 aaPredicted RBP10.28□□□□□ -0.76
CKAP4-202ENST00000552828 IDH3GP51553 393 aaPredicted RBP10.28□□□□□ -0.76
CKAP4-202ENST00000552828 SRSF2Q01130 221 aaKnown RBP10.28□□□□□ -0.76
CKAP4-202ENST00000552828 NAAAQ02083 359 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 OR7A5Q15622 319 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 SPATS1Q496A3 300 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 ENTPD8Q5MY95 495 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 SWT1Q5T5J6 900 aaKnown RBP10.28□□□□□ -0.76
CKAP4-202ENST00000552828 C1orf140Q5VVS0 124 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 ZNF613Q6PF04 617 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 IL17RELQ6ZVW7 336 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 CREB3L2Q70SY1 520 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 SLC46A3Q7Z3Q1 461 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 LSRQ86X29 649 aaPredicted RBP10.28□□□□□ -0.76
CKAP4-202ENST00000552828 CARM1Q86X55 608 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 RBM45Q8IUH3 476 aaKnown RBP10.28□□□□□ -0.76
CKAP4-202ENST00000552828 RNF148Q8N7C7 305 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 ANKK1Q8NFD2 765 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 OR4F15Q8NGB8 312 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 OR4D11Q8NGI4 311 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 SLC38A4Q969I6 547 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 FAM162AQ96A26 154 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 TPD52L3Q96J77 140 aa10.28□□□□□ -0.76
CKAP4-202ENST00000552828 VRK1Q99986 396 aaPredicted RBP10.28□□□□□ -0.76
CKAP4-202ENST00000552828 A0A087WUJ7 227 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 CPSF4LA6NMK7 179 aaKnown RBP10.27□□□□□ -0.77
CKAP4-202ENST00000552828 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 H0YHG0 523 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 NPIPB7O75200 414 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 AHSA1O95433 338 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 ZNF682O95780 498 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 IGKV3-15P01624 115 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 TACSTD2P09758 323 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 CECR9P0C854 216 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 T-ENOLP0DO92 83 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 HSD17B1P14061 328 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 NCK1P16333 377 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 TCN1P20061 433 aaPredicted RBP10.27□□□□□ -0.77
CKAP4-202ENST00000552828 SELENOPP49908 381 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 CDH12P55289 794 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 LGALS3BPQ08380 585 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 NPTX1Q15818 432 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 CR1LQ2VPA4 569 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 IQCCQ4KMZ1 466 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 LIPNQ5VXI9 398 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 TMEM225Q6GV28 225 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 GLYATQ6IB77 296 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 C5orf46Q6UWT4 87 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms