RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 CDADC1Q9BWV3 514 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SHCBP1LQ9BZQ2 653 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 EGLN1Q9GZT9 426 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 GRHL1Q9NZI5 618 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SLC7A8Q9UHI5 535 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 TRAPPC4Q9Y296 219 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 FAM96BQ9Y3D0 163 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SPIN1Q9Y657 262 aaPredicted RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 MIF4GDA9UHW6 222 aaKnown RBP6.78□□□□□ -1.32
PRIM1-208ENST00000552590 H0YHG0 523 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 ZNF264O43296 627 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 LCKP06239 509 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 PRPS2P11908 318 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 RPS2P15880 293 aaKnown RBP6.78□□□□□ -1.32
PRIM1-208ENST00000552590 CHATP28329 748 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 ATP6V0D1P61421 351 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 SLC35A1P78382 337 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 DGCR2P98153 550 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 COX10Q12887 443 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 GTF2H2Q13888 395 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 GTF2H2CQ6P1K8 395 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 GOLGA7Q7Z5G4 137 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 CALHM3Q86XJ0 350 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 KLBQ86Z14 1044 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 IGDCC3Q8IVU1 814 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 TMEM99Q8N816 258 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 COX18Q8N8Q8 333 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 ICA1LQ8NDH6 482 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 CPEB3Q8NE35 698 aaKnown RBP6.78□□□□□ -1.32
PRIM1-208ENST00000552590 ISOC1Q96CN7 298 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 CLPTM1LQ96KA5 538 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 PRR25Q96S07 402 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 CCDC106Q9BWC9 280 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 MEGF9Q9H1U4 602 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 POPDC3Q9HBV1 291 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 TMEM106BQ9NUM4 274 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 ACER3Q9NUN7 267 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 ZNRD1Q9P1U0 126 aa6.78□□□□□ -1.32
PRIM1-208ENST00000552590 ZSCAN5BA6NJL1 495 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 EIF4E2O60573 245 aaKnown RBP6.77□□□□□ -1.33
PRIM1-208ENST00000552590 SLC43A1O75387 559 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 TOX4O94842 621 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 AKR7A3O95154 331 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 UBL4AP11441 157 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 MMP9P14780 707 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 DRD4P21917 467 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 MDH2P40926 338 aaKnown RBP6.77□□□□□ -1.33
PRIM1-208ENST00000552590 GIPRP48546 466 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 SLC12A2P55011 1212 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 IFT88Q13099 833 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 HEPACAMQ14CZ8 416 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 CEACAM16Q2WEN9 425 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 ARHGAP11BQ3KRB8 267 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 RNASEH2BQ5TBB1 312 aaKnown RBP6.77□□□□□ -1.33
PRIM1-208ENST00000552590 SEL1L2Q5TEA6 688 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 CDC73Q6P1J9 531 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 PIWIL3Q7Z3Z3 882 aaKnown RBP6.77□□□□□ -1.33
PRIM1-208ENST00000552590 SATL1Q86VE3 508 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 VSTM4Q8IW00 320 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 CCDC36Q8IYA8 594 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 PAQR4Q8N4S7 273 aaPredicted RBP6.77□□□□□ -1.33
PRIM1-208ENST00000552590 CDRT4Q8N9R6 151 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 C16orf78Q8WTQ4 265 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 TMEM234Q8WY98 164 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 C11orf40Q8WZ69 217 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 AMDHD1Q96NU7 426 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 GPR61Q9BZJ8 451 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 EDA2RQ9HAV5 297 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 GPR35Q9HC97 309 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 IFNKQ9P0W0 207 aa6.77□□□□□ -1.33
PRIM1-208ENST00000552590 FAT2Q9NYQ8 4349 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 GNG14A0A1W2PPG7 69 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 AQP7P3A6NL99 342 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 C22orf46C9J442 243 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 RPL36A-HNRNPH2H7BZ11 118 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 OR7A17O14581 309 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 RGS13O14921 159 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 DNAJA2O60884 412 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 ZNF205O95201 554 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 PDYNP01213 254 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 EPHA3P29320 983 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 LSP1P33241 339 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 APOBEC1P41238 236 aaKnown RBP6.76□□□□□ -1.33
PRIM1-208ENST00000552590 RAE1P78406 368 aaKnown RBP6.76□□□□□ -1.33
PRIM1-208ENST00000552590 HABP2Q14520 560 aaPredicted RBP6.76□□□□□ -1.33
PRIM1-208ENST00000552590 TMEM255AQ5JRV8 349 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 NOXRED1Q6NXP6 359 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 SLC27A4Q6P1M0 643 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 DRICH1Q6PGQ1 229 aaPredicted RBP6.76□□□□□ -1.33
PRIM1-208ENST00000552590 CREB3L2Q70SY1 520 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 ZNF551Q7Z340 670 aaPredicted RBP6.76□□□□□ -1.33
PRIM1-208ENST00000552590 SZRD1Q7Z422 152 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 ISCA2Q86U28 154 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 ZNF283Q8N7M2 679 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 ZNF519Q8TB69 540 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 STAG3L4Q8TBR4 150 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 GIMAP5Q96F15 307 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 TSPAN17Q96FV3 270 aa6.76□□□□□ -1.33
PRIM1-208ENST00000552590 PLEKHA8Q96JA3 519 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms