RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CATSPER1Q8NEC5 780 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 OR4K2Q8NGD2 314 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 OR1S2Q8NGQ3 325 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 OR5K2Q8NHB8 316 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 FAM222BQ8WU58 562 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 PYDC1Q8WXC3 89 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 OR8D1Q8WZ84 308 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 AP3S1Q92572 193 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 RTP4Q96DX8 246 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 WDR34Q96EX3 536 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 WFIKKN1Q96NZ8 548 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 EPYCQ99645 322 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 ACP6Q9NPH0 428 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 ISYNA1Q9NPH2 558 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 BATF3Q9NR55 127 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 PAK1IP1Q9NWT1 392 aaPredicted RBP5.38□□□□□ -1.55
VPS29-210ENST00000552130 SLC7A7Q9UM01 511 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 CSNK1G3Q9Y6M4 447 aa5.38□□□□□ -1.55
VPS29-210ENST00000552130 A0A0A6YYD4 124 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 IGHV2-70DA0A0C4DH43 119 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 LOC101059948A0A1B0GTJ6 334 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 GAGE12JA6NER3 117 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 HIDE1A8MVS5 230 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 H0Y980 276 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 HSD17B6O14756 317 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 TOM1O60784 492 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 SYF2O95926 243 aaKnown RBP5.37□□□□□ -1.55
VPS29-210ENST00000552130 OAS1P00973 400 aaKnown RBP5.37□□□□□ -1.55
VPS29-210ENST00000552130 ORM1P02763 201 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 HKR1P10072 659 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 CD79BP40259 229 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 FUT6P51993 359 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 DLX5P56178 289 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 LSM6P62312 80 aaKnown RBP5.37□□□□□ -1.55
VPS29-210ENST00000552130 BLOC1S1P78537 153 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 DHODHQ02127 395 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 STX4Q12846 297 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 EIF2B1Q14232 305 aaKnown RBP5.37□□□□□ -1.55
VPS29-210ENST00000552130 LAGE3Q14657 143 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 NDUFA9Q16795 377 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 DGUOKQ16854 277 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 RFTN2Q52LD8 501 aaPredicted RBP5.37□□□□□ -1.55
VPS29-210ENST00000552130 EIPR1Q53HC9 387 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 DUPD1Q68J44 220 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 Q6ZVQ6 151 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 SMIM15Q7Z3B0 74 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 MREGQ8N565 214 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 IQCF1Q8N6M8 205 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 SLC37A3Q8NCC5 494 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 OR2T12Q8NG77 320 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 IFT81Q8WYA0 676 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 C22orf15Q8WYQ4 148 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 PTH2Q96A98 100 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 SGTBQ96EQ0 304 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 ABHD8Q96I13 439 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 PRRT1Q99946 306 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 SLC35A5Q9BS91 424 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 TRIM51Q9BSJ1 452 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 BCL2L14Q9BZR8 327 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 METTL9Q9H1A3 318 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 RNF41Q9H4P4 317 aaPredicted RBP5.37□□□□□ -1.55
VPS29-210ENST00000552130 FNDC4Q9H6D8 234 aaPredicted RBP5.37□□□□□ -1.55
VPS29-210ENST00000552130 ELF5Q9UKW6 265 aaPredicted RBP5.37□□□□□ -1.55
VPS29-210ENST00000552130 TFR2Q9UP52 801 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 KCNIP3Q9Y2W7 256 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 OR2W1Q9Y3N9 320 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 STYXL1Q9Y6J8 313 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 ELP1O95163 1332 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 ABCB11O95342 1321 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 MAPK8IP3Q9UPT6 1336 aa5.37□□□□□ -1.55
VPS29-210ENST00000552130 A0A0A6YYD5 115 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 A0A0G2JK05 382 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 TRBV4-1A0A0J9YWV2 114 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 GNG14A0A1W2PPG7 69 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 SLC5A10A0PJK1 596 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 FAM231BA6NCW3 169 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 SNURFLB1AK76 121 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 H3BMQ9 156 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.36□□□□□ -1.55
VPS29-210ENST00000552130 M0QZ92 97 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 IDH3BO43837 385 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 CEACAM4O75871 244 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 MAGEA3P43357 314 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 GAS1P54826 345 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 DCDC1P59894 354 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 RIGQ13278 110 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 GNMTQ14749 295 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 RAB35Q15286 201 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 TAL2Q16559 108 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 RFX4Q33E94 735 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 ACTL10Q5JWF8 245 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 DCAF10Q5QP82 559 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 LPCAT4Q643R3 524 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 Q6ZSV7 163 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 CCDC121Q6ZUS5 278 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 CMC1Q7Z7K0 106 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 PNLDC1Q8NA58 520 aaKnown RBP5.36□□□□□ -1.55
VPS29-210ENST00000552130 VN1R2Q8NFZ6 395 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 OR6K6Q8NGW6 343 aa5.36□□□□□ -1.55
VPS29-210ENST00000552130 ITFG1Q8TB96 612 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms