RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 RACGAP1Q9H0H5 632 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 TPK1Q9H3S4 243 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 MRPL39Q9NYK5 338 aaKnown RBP11.06□□□□□ -0.64
PTCH1-221ENST00000550914 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 POFUT2Q9Y2G5 429 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 A0A0B4J2E0 115 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 A0A1B0GX12 115 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF726A6NNF4 738 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 LYNX1G3V0Z9 82 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 ENTPD5O75356 428 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 UBL3O95164 117 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 RAB36O95755 333 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 BGLAPP02818 100 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 LYNX1P0DP58 116 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 HLA-DOBP13765 273 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 GPR6P46095 362 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-221ENST00000550914 NCALDP61601 193 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 CDK6Q00534 326 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 GALK2Q01415 458 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 PMS2P3Q13401 168 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 CCNIQ14094 377 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 MSMPQ1L6U9 139 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 GCNT6Q5T4J0 391 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 CARD17Q5XLA6 110 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 SLC2A7Q6PXP3 512 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 COMTD1Q86VU5 262 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 NFKBIDQ8NI38 313 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 MGARPQ8TDB4 240 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 RDH5Q92781 318 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF607Q96SK3 696 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 FOXB1Q99853 325 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 EMC6Q9BV81 110 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 ULBP2Q9BZM5 246 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF385DQ9H6B1 395 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 TMEM38AQ9H6F2 299 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 SLC25A37Q9NYZ2 338 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF224Q9NZL3 707 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 RAB21Q9UL25 225 aa11.05□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF346Q9UL40 294 aaKnown RBP11.05□□□□□ -0.64
PTCH1-221ENST00000550914 MEGF8Q7Z7M0 2845 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 PLPP3O14495 311 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 MT-ATP6P00846 226 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 SAGP10523 405 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-221ENST00000550914 B4GALT1P15291 398 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 CBLP22681 906 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 LSP1P33241 339 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 PTDSS1P48651 473 aaKnown RBP11.04□□□□□ -0.64
PTCH1-221ENST00000550914 RGS8P57771 180 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-221ENST00000550914 RAB1AP62820 205 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 PIGFQ07326 219 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 OR1Q1Q15612 314 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 MMEL1Q495T6 779 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 GKAP1Q5VSY0 366 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-221ENST00000550914 RINLQ6ZS11 566 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 PIWIL3Q7Z3Z3 882 aaKnown RBP11.04□□□□□ -0.64
PTCH1-221ENST00000550914 RANBP3LQ86VV4 465 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-221ENST00000550914 MSRB3Q8IXL7 192 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 OR6N1Q8NGY5 312 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 CLDND2Q8NHS1 167 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 TMEM186Q96B77 213 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 TXNDC15Q96J42 360 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF416Q9BWM5 594 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 HIF1ANQ9NWT6 349 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 MED29Q9NX70 200 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 NKIRAS1Q9NYS0 192 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTCH1-221ENST00000550914 SLC7A8Q9UHI5 535 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 CORO2BQ9UQ03 480 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 GRIP1Q9Y3R0 1128 aa11.04□□□□□ -0.64
PTCH1-221ENST00000550914 V9GYY5 206 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-221ENST00000550914 TPST1O60507 370 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 FMO6PO60774 539 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 SERPINB7O75635 380 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 HPXP02790 462 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 SERPINA5P05154 406 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 MSMBP08118 114 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 SLC6A2P23975 617 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 GIPRP48546 466 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 CSNK1A1P48729 337 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 AQP5P55064 265 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 STX1BP61266 288 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 CAMK2DQ13557 499 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 GLIPR1L2Q4G1C9 344 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 BLOC1S3Q6QNY0 202 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 EPGNQ6UW88 154 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 C12orf54Q6X4T0 127 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 SEMA6DQ8NFY4 1073 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 OR5J2Q8NH18 312 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 MOGAT1Q96PD6 335 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 SYT3Q9BQG1 590 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 GPR160Q9UJ42 338 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 SLC13A4Q9UKG4 626 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 USH1CQ9Y6N9 552 aa11.03□□□□□ -0.64
PTCH1-221ENST00000550914 TRBV5-3A0A0A0MS03 114 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 TRAV20A0A0B4J274 112 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 SLC22A23A1A5C7 686 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 TPST2O60704 377 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms