RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 HOXB9P17482 250 aaPredicted RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 APEX1P27695 318 aaKnown RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 MRPL19P49406 292 aaKnown RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 EVX1P49640 407 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 SNTB2Q13425 540 aaKnown RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 C1DQ13901 141 aaKnown RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 DAG1Q14118 895 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 ADRM1Q16186 407 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 CR1LQ2VPA4 569 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 SLC9B1Q4ZJI4 515 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 FAM91A1Q658Y4 838 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 ULK3Q6PHR2 472 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 DHRS4L2Q6PKH6 230 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 H1FNTQ75WM6 255 aaPredicted RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 ZNF627Q7L945 461 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 MAVSQ7Z434 540 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 SPATA21Q7Z572 469 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 MDP1Q86V88 176 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 MYPOPQ86VE0 399 aaPredicted RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 UEVLDQ8IX04 471 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 C20orf196Q8IYI0 205 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 RFLNBQ8N5W9 214 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 SCAIQ8N9R8 606 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 OR9I1Q8NGQ6 314 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 UBASH3BQ8TF42 649 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 GTF2H4Q92759 462 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 MAL2Q969L2 176 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 SLC41A3Q96GZ6 507 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 C1orf159Q96HA4 380 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 LRR1Q96L50 414 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 EPYCQ99645 322 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 SOX7Q9BT81 388 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 SPATA5L1Q9BVQ7 753 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 PAIP1Q9H074 479 aaKnown RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 NOX3Q9HBY0 568 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 CRLF2Q9HC73 371 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 DYNLRB1Q9NP97 96 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 KLHL14Q9P2G3 628 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 SEC14L4Q9UDX3 406 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 TESQ9UGI8 421 aaKnown RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.58□□□□□ -1.36
NEK3-201ENST00000550331 GMEB1Q9Y692 573 aa6.58□□□□□ -1.36
NEK3-201ENST00000550331 V9GYY5 206 aaPredicted RBP6.58□□□□□ -1.36
NEK3-201ENST00000550331 IGKV1D-42A0A075B6H8 117 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 A0A087WUJ7 227 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 TMEM129A0AVI4 362 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 ZNF503-AS2A6NEH8 195 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 PRORSD1PA6NEY8 169 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 M0R233 179 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 SYNGR3O43761 229 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 DEAF1O75398 565 aaPredicted RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 IGFBP1P08833 259 aaPredicted RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 IFNGR1P15260 489 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 NQO1P15559 274 aaKnown RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 PCMT1P22061 227 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 NR4A1P22736 598 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 PPIBP23284 216 aaKnown RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 CFPP27918 469 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 HTR2AP28223 471 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 GRPRP30550 384 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 CAPZA2P47755 286 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 DVL1P1P54792 670 aaPredicted RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 CDH15P55291 814 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 STX1BP61266 288 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 NCALDP61601 193 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 HOXC5Q00444 222 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 NPRL3Q12980 569 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 RIN1Q13671 783 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 GSG1Q2KHT4 349 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 LRIF1Q5T3J3 769 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 GCNT6Q5T4J0 391 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 KRT80Q6KB66 452 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 SLC2A7Q6PXP3 512 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 C12orf54Q6X4T0 127 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 SNX32Q86XE0 403 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 KRT73Q86Y46 540 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 CDK20Q8IZL9 346 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 ZCCHC24Q8N2G6 241 aaKnown RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 LINC01356Q8N9X3 169 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 BHLHE22Q8NFJ8 381 aaPredicted RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 MGARPQ8TDB4 240 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 CKAP2Q8WWK9 683 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 TAAR8Q969N4 342 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 MRPL24Q96A35 216 aaKnown RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 SLC47A1Q96FL8 570 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 OR52B2Q96RD2 323 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 SNX18Q96RF0 628 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 ASPNQ9BXN1 380 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 RSPO3Q9BXY4 272 aaPredicted RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 MS4A5Q9H3V2 200 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 DENND2DQ9H6A0 471 aaPredicted RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 EVA1AQ9H8M9 152 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 B3GAT2Q9NPZ5 323 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 B3GNT2Q9NY97 397 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 MRPL39Q9NYK5 338 aaKnown RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 SLC25A37Q9NYZ2 338 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 TMEFF2Q9UIK5 374 aaPredicted RBP6.57□□□□□ -1.36
NEK3-201ENST00000550331 FBXL3Q9UKT7 428 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 CMAHPQ9Y471 501 aa6.57□□□□□ -1.36
NEK3-201ENST00000550331 SPEF1Q9Y4P9 236 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms