RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 FNDC11Q9BVV2 318 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 POLR2J2Q9GZM3 115 aaKnown RBP9.82□□□□□ -0.84
RAB5B-208ENST00000550283 POLR2J3Q9H1A7 115 aaKnown RBP9.82□□□□□ -0.84
RAB5B-208ENST00000550283 RNPEPL1Q9HAU8 725 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 GPR35Q9HC97 309 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 SLC17A5Q9NRA2 495 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 PARPBPQ9NWS1 579 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 TAS2R16Q9NYV7 291 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 ACTR3BQ9P1U1 418 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 UPB1Q9UBR1 384 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 RPS6KA6Q9UK32 745 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 RCE1Q9Y256 329 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 MED31Q9Y3C7 131 aa9.82□□□□□ -0.84
RAB5B-208ENST00000550283 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
RAB5B-208ENST00000550283 ROS1P08922 2347 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 CIB4A0PJX0 185 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 CASKO14936 926 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 RNF13O43567 381 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 MPGP29372 298 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 OMPP47874 163 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 LIMS1P48059 325 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF83P51522 516 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 IST1P53990 364 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 RPS4XP62701 263 aaKnown RBP9.81□□□□□ -0.84
RAB5B-208ENST00000550283 PRKCDQ05655 676 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 BSPH1Q075Z2 132 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 PPA1Q15181 289 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 CEACAM16Q2WEN9 425 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 NCMAPQ5T1S8 102 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 LCN8Q6JVE9 175 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 LRFN4Q6PJG9 635 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 THSD4Q6ZMP0 1018 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 MBOAT2Q6ZWT7 520 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 SLC35D2Q76EJ3 337 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 NANOGNBQ7Z5D8 188 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 KBTBD8Q8NFY9 601 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 OR1K1Q8NGR3 316 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 OR51A7Q8NH64 312 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 FGFBP3Q8TAT2 258 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 ACOT11Q8WXI4 607 aaPredicted RBP9.81□□□□□ -0.84
RAB5B-208ENST00000550283 ZDHHC16Q969W1 377 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 FAM46AQ96IP4 442 aaKnown RBP9.81□□□□□ -0.84
RAB5B-208ENST00000550283 HDHD5Q9BXW7 423 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 LINC00470Q9BZP3 86 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 OR10A4Q9H209 315 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 CRLF2Q9HC73 371 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 CCM2LQ9NUG4 571 aaPredicted RBP9.81□□□□□ -0.84
RAB5B-208ENST00000550283 NDE1Q9NXR1 346 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF226Q9NYT6 803 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF224Q9NZL3 707 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 ITGB1BP2Q9UKP3 347 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 SAMD4AQ9UPU9 718 aaKnown RBP9.81□□□□□ -0.84
RAB5B-208ENST00000550283 NOX1Q9Y5S8 564 aa9.81□□□□□ -0.84
RAB5B-208ENST00000550283 VPS13CQ709C8 3753 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 MAP1AP78559 2803 aaPredicted RBP9.8□□□□□ -0.84
RAB5B-208ENST00000550283 A0A1W2PRQ8 180 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 MCIDASD6RGH6 385 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 RPL36A-HNRNPH2H7BZ11 118 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 CLOCKO15516 846 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ENTPD5O75356 428 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 SLC43A1O75387 559 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ATE1O95260 518 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 H1F0P07305 194 aaKnown RBP9.8□□□□□ -0.84
RAB5B-208ENST00000550283 CELA3BP08861 270 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 PPP3CBP16298 524 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 RHCEP18577 417 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 CD53P19397 219 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 MYBPC1Q00872 1141 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 FMODQ06828 376 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 DGCR6Q14129 220 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 TRIM25Q14258 630 aaKnown RBP9.8□□□□□ -0.84
RAB5B-208ENST00000550283 MFSD13AQ14CX5 517 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 TESK1Q15569 626 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ACKR1Q16570 336 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 TBRG1Q3YBR2 411 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 BEX5Q5H9J7 111 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 FGD3Q5JSP0 725 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 TIMM23BQ5SRD1 257 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ARMC4Q5T2S8 1044 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 C1orf146Q5VVC0 180 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ADAM5Q6NVV9 412 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 B3GLCTQ6Y288 498 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF730Q6ZMV8 503 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF704Q6ZNC4 412 aaPredicted RBP9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ZDHHC21Q8IVQ6 265 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ADGRG5Q8IZF4 528 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 POMGNT2Q8NAT1 580 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 OR4K5Q8NGD3 323 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 IGFBPL1Q8WX77 278 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ASB10Q8WXI3 467 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 HSD17B8Q92506 261 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 HDAC2Q92769 488 aaKnown RBP9.8□□□□□ -0.84
RAB5B-208ENST00000550283 TMEM54Q969K7 222 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 NMD3Q96D46 503 aaKnown RBP9.8□□□□□ -0.84
RAB5B-208ENST00000550283 HS6ST2Q96MM7 605 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF347Q96SE7 839 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 PIP5K1AQ99755 562 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 DCLRE1BQ9H816 532 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 IL1RAPQ9NPH3 570 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms