RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ECSITQ9BQ95 431 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 ULBP2Q9BZM5 246 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 POLR2J2Q9GZM3 115 aaKnown RBP9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 PCDHAC1Q9H158 963 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 POLR2J3Q9H1A7 115 aaKnown RBP9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF385DQ9H6B1 395 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 NPHS2Q9NP85 383 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 NANSQ9NR45 359 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 B3GNT2Q9NY97 397 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 SEC14L4Q9UDX3 406 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF229Q9UJW7 825 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 ADAM21Q9UKJ8 722 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 BAG5Q9UL15 447 aa9.44□□□□□ -0.9
VTI1BP3-201ENST00000550220 IGHV2OR16-5A0A0B4J2B6 119 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 BBIP1A8MTZ0 92 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 VWC2LB2RUY7 222 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 UBL3O95164 117 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 RAB36O95755 333 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 HPRP00739 348 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 FAM157CP0CG43 387 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 TROVE2P10155 538 aaKnown RBP eCLIP9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 CD79AP11912 226 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 HLA-DOBP13765 273 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 CD247P20963 164 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 NR4A1P22736 598 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 CALCRP30988 508 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 THBS2P35442 1172 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 NR4A2P43354 598 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 CSNK1A1P48729 337 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 RPS23P62266 143 aaKnown RBP9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 HGFACQ04756 655 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 NPRL3Q12980 569 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 MAPRE2Q15555 327 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF74Q16587 644 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 VMACQ2NL98 169 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 TRMT5Q32P41 509 aaKnown RBP9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 IQCCQ4KMZ1 466 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 CARD17Q5XLA6 110 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 ERICH5Q6P6B1 374 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 NHLRC1Q6VVB1 395 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF813Q6ZN06 617 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 HDDC2Q7Z4H3 204 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 MDP1Q86V88 176 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 RETREG3Q86VR2 466 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR8J3Q8NGG0 315 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR6T1Q8NGN1 323 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 ADAMTS16Q8TE57 1224 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 HTRA1Q92743 480 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF837Q96EG3 531 aaPredicted RBP9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 TXNDC15Q96J42 360 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 MOGAT1Q96PD6 335 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 SORCS2Q96PQ0 1159 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 DOK1Q99704 481 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 FOXB1Q99853 325 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 EMC6Q9BV81 110 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 BEX2Q9BXY8 128 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 MS4A5Q9H3V2 200 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 MED29Q9NX70 200 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 STX18Q9P2W9 335 aaKnown RBP9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 CMAHPQ9Y471 501 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 ATRQ13535 2644 aa9.43□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC22A23A1A5C7 686 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 HTR3EA5X5Y0 456 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 CPSF4LA6NMK7 179 aaKnown RBP9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 CENPBD1B2RD01 187 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 hCG_2039718K7EN88 272 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 M0R3H8 397 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 FARS2O95363 451 aaKnown RBP9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 CH25HO95992 272 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 BCL10O95999 233 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 PTHP01270 115 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 IGF2P01344 180 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 OPN1SWP03999 348 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR8G3PP0DMU2 310 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 THRBP10828 461 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 IFNGR1P15260 489 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 IFNA8P32881 189 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 THBS4P35443 961 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 GLRXP35754 106 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 BIDP55957 195 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 RAB1AP62820 205 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 GALK2Q01415 458 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 CAMK2DQ13557 499 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 MMEL1Q495T6 779 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 NRN1LQ496H8 165 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 REP15Q6BDI9 236 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 NANOGP8Q6NSW7 305 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC35D2Q76EJ3 337 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 CXXC5Q7LFL8 322 aaKnown RBP9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 SPATA21Q7Z572 469 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 PCYOX1LQ8NBM8 494 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 GPR32P1Q8NGA4 272 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 TMEM158Q8WZ71 300 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF566Q969W8 418 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 LRRC58Q96CX6 371 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 THOC1Q96FV9 657 aaKnown RBP9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC25A44Q96H78 314 aaPredicted RBP9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 FOXN4Q96NZ1 517 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 MDFIQ99750 246 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 WFDC6Q9BQY6 131 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms