RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 A0A0A6YYH2 397 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TRBV2A0A0J9YWF9 115 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 A0A1B0GVC2 190 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 GXYLT2A0PJZ3 443 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TBC1D3BA6NDS4 549 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TBC1D3FA6NER0 549 aaPredicted RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TMEM202A6NGA9 273 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 GGT3PA6NGU5 568 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 A6NIN4 97 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 A6NJ64 397 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 OR2AG2A6NM03 316 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 E9PI62 339 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SAP18O00422 153 aaKnown RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 UBE2CO00762 179 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 GOSR2O14653 212 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PHYHO14832 338 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TO15178 435 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 XRCC3O43542 346 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 VEGFDO43915 354 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SSX5O60225 188 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TMPRSS11DO60235 418 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 CDC40O60508 579 aaKnown RBP eCLIP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PCDH8O95206 1070 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SIX6O95475 246 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 AK1P00568 194 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 HMGN2P05204 90 aaKnown RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 ASGR1P07306 291 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 VSIG10L2P0DP72 767 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TPT1P13693 172 aaKnown RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 ABOP16442 354 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SRMP19623 302 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 CSNK2A2P19784 350 aaPredicted RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TBXA2RP21731 343 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 RPS4Y1P22090 263 aaKnown RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 EDNRAP25101 427 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 MPZP25189 248 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 DDX6P26196 483 aaKnown RBP eCLIP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 MST1P26927 711 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 CST5P28325 142 aaPredicted RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SDHAP31040 664 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 DCTDP32321 178 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 CSF2RBP32927 897 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 IGFALSP35858 605 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 AHRP35869 848 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 ACVR1BP36896 505 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PMELP40967 661 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SSR2P43308 183 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 FNTBP49356 437 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 NCBP2P52298 156 aaKnown RBP eCLIP3.45□□□□□ -1.866e-8■□□□□ 11.3
RAB5B-207ENST00000549915 CAPZA1P52907 286 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 CTSCP53634 463 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 OR12D2P58182 307 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TAS2R19P59542 299 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 RPS11P62280 158 aaKnown RBP eCLIP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 EIF5AP63241 154 aaKnown RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 FKBP1BP68106 108 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SIRPAP78324 504 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SORDQ00796 357 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TMEM115Q12893 351 aaPredicted RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 FOXD4Q12950 439 aaPredicted RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 DUSP8Q13202 625 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 CRMP1Q14194 572 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 GRM7Q14831 915 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 LASP1Q14847 261 aaKnown RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 CEBPEQ15744 281 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TAF12Q16514 161 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PCGF3Q3KNV8 242 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 IGSF11Q5DX21 431 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TMEM255AQ5JRV8 349 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TEX30Q5JUR7 227 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PRAMEF19Q5SWL8 479 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PIP5KL1Q5T9C9 394 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 FAM46CQ5VWP2 391 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TBC1D3GQ6DHY5 549 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 AWAT2Q6E213 333 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 OR7E24Q6IFN5 339 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 EIF5AL1Q6IS14 154 aaKnown RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 C11orf87Q6NUJ2 197 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 H3F3CQ6NXT2 135 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 JMJD6Q6NYC1 403 aaPredicted RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 FAHD2BQ6P2I3 314 aaPredicted RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 ZNF613Q6PF04 617 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 TMEM220Q6QAJ8 160 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 DRAM2Q6UX65 266 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 NHLRC1Q6VVB1 395 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 WDR88Q6ZMY6 472 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 ZNF600Q6ZNG1 722 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 RFLNAQ6ZTI6 216 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 ABHD13Q7L211 337 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PRSS45Q7RTY3 260 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 OR2W3Q7Z3T1 314 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SZRD1Q7Z422 152 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 HSD11B1LQ7Z5J1 315 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 ZNF546Q86UE3 836 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PARGQ86W56 976 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 LDLRAD3Q86YD5 345 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 NKAIN4Q8IVV8 208 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 SLC35F3Q8IY50 421 aa3.45□□□□□ -1.86
RAB5B-207ENST00000549915 PUSL1Q8N0Z8 303 aaKnown RBP3.45□□□□□ -1.86
RAB5B-207ENST00000549915 MMP21Q8N119 569 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms