RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 MTPNP58546 118 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 CYP51A1Q16850 503 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 GSG1Q2KHT4 349 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 FAM166AQ6J272 317 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 ZNF613Q6PF04 617 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 WDR88Q6ZMY6 472 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 SPATA21Q7Z572 469 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 DPP10Q8N608 796 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 OR6T1Q8NGN1 323 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 DYDC1Q8WWB3 177 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 TMEM158Q8WZ71 300 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 MS4A3Q96HJ5 214 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 ANKRD27Q96NW4 1050 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 MCHR1Q99705 422 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 ULBP2Q9BZM5 246 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 SHARPINQ9H0F6 387 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 RAB1BQ9H0U4 201 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 RABEP2Q9H5N1 569 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 CHODLQ9H9P2 273 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 FBXO9Q9UK97 447 aaPredicted RBP15.03■□□□□ -0
CHMP1A-205ENST00000548650 KCNS2Q9ULS6 477 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 LOC100289279A0A1B0GTE1 492 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 CHP2O43745 196 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 SERPINI2O75830 405 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 LYPD3O95274 346 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 STAMBPO95630 424 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 MT-ATP6P00846 226 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 THY1P04216 161 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 ZNF14P17017 642 aaPredicted RBP15.02■□□□□ -0
CHMP1A-205ENST00000548650 GIFP27352 417 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 RBBP4Q09028 425 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 CAMK2DQ13557 499 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 DAG1Q14118 895 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 DUSP7Q16829 419 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 MSMPQ1L6U9 139 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 KRT80Q6KB66 452 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 LINC00114Q6XXX2 140 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 ZNF813Q6ZN06 617 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 PXKQ7Z7A4 578 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 TSPYL5Q86VY4 417 aaPredicted RBP15.02■□□□□ -0
CHMP1A-205ENST00000548650 ZCCHC24Q8N2G6 241 aaKnown RBP15.02■□□□□ -0
CHMP1A-205ENST00000548650 C10orf53Q8N6V4 93 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 IL17RDQ8NFM7 739 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 OR4D11Q8NGI4 311 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 OR5J2Q8NH18 312 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 CKAP2Q8WWK9 683 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 CGREF1Q99674 301 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 SOX7Q9BT81 388 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 DYNLRB1Q9NP97 96 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 B3GAT2Q9NPZ5 323 aa15.02■□□□□ -0
CHMP1A-205ENST00000548650 C8BP07358 591 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 CD79AP11912 226 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 DAOP14920 347 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 NR4A1P22736 598 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 ZNF74Q16587 644 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 IQCCQ4KMZ1 466 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 IL17RELQ6ZVW7 336 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 OR6N1Q8NGY5 312 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 NEU4Q8WWR8 484 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 THOC1Q96FV9 657 aaKnown RBP15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 FOXB1Q99853 325 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 NDUFAF1Q9Y375 327 aa15.01□□□□□ -0.01
CHMP1A-205ENST00000548650 CPSF4LA6NMK7 179 aaKnown RBP15□□□□□ -0.01
CHMP1A-205ENST00000548650 M0QX08 132 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 ANGPT2O15123 496 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 ERCC1P07992 297 aaPredicted RBP15□□□□□ -0.01
CHMP1A-205ENST00000548650 ADORA3P0DMS8 318 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 ZNF35P13682 527 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 CD247P20963 164 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 AHCYP23526 432 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 PCGF2P35227 344 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 CSNK1A1P48729 337 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 BIDP55957 195 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 ENTPD8Q5MY95 495 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 FAM120AOSQ5T036 256 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 RBM45Q8IUH3 476 aaKnown RBP15□□□□□ -0.01
CHMP1A-205ENST00000548650 ZNF540Q8NDQ6 660 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 MRPL24Q96A35 216 aaKnown RBP15□□□□□ -0.01
CHMP1A-205ENST00000548650 TAMM41Q96BW9 452 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 ZNF426Q9BUY5 554 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 MRPL37Q9BZE1 423 aaKnown RBP15□□□□□ -0.01
CHMP1A-205ENST00000548650 KAT8Q9H7Z6 458 aaKnown RBP15□□□□□ -0.01
CHMP1A-205ENST00000548650 INTS9Q9NV88 658 aaKnown RBP15□□□□□ -0.01
CHMP1A-205ENST00000548650 POFUT2Q9Y2G5 429 aa15□□□□□ -0.01
CHMP1A-205ENST00000548650 LRP5LA4QPB2 252 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 ZNF726A6NNF4 738 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 VSTM5A8MXK1 200 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 C11orf98E9PRG8 122 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 TACSTD2P09758 323 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 IFNGR1P15260 489 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 SRD5A1P18405 259 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 THBS2P35442 1172 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 GIPRP48546 466 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 PTDSS1P48651 473 aaKnown RBP14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 CRYBA2P53672 197 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 PIGFQ07326 219 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 NFYCQ13952 458 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 KRTAP24-1Q3LI83 254 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 SNX32Q86XE0 403 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 ZNF786Q8N393 782 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms