RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ADAM10O14672 748 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 DCNP07585 359 aaKnown RBP16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 MMP15P51511 669 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 P2RX1P51575 399 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 MRPS15P82914 257 aaKnown RBP16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 ALKBH1Q13686 389 aaKnown RBP16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 HES5Q5TA89 166 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 ZNF574Q6ZN55 896 aaPredicted RBP16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 DPY19L4Q7Z388 723 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 ADGRG3Q86Y34 549 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 SLC7A5P1Q8MH63 180 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 OR6N2Q8NGY6 317 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 ZNF671Q8TAW3 534 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 RELTQ969Z4 430 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 CLDN23Q96B33 292 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 GFM1Q96RP9 751 aaKnown RBP16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 LAMP5Q9UJQ1 280 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 BOLA1Q9Y3E2 137 aa16.77■□□□□ 0.27
PRPF40B-208ENST00000548436 TMED7-TICAM2A0A0A6YYA0 188 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 RGS13O14921 159 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 SUSD5O60279 629 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 SLC25A12O75746 678 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 PLGP00747 810 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 ADRB1P08588 477 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 CXCL12P48061 93 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 NOXA1Q86UR1 476 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 DEFB123Q8N688 67 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 BMPERQ8N8U9 685 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 SLC38A9Q8NBW4 561 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 STT3BQ8TCJ2 826 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 GPR119Q8TDV5 335 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 DUSP19Q8WTR2 217 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 NDEL1Q9GZM8 345 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 TMED7Q9Y3B3 224 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 NPIPB7O75200 414 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 ALOX5APP20292 161 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 POLR2HP52434 150 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 RNF4P78317 190 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 OTPQ5XKR4 325 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 PRSS45Q7RTY3 260 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 MAMDC2Q7Z304 686 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 IZUMO1Q8IYV9 350 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 CMTM4Q8IZR5 234 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 ZNF433Q8N7K0 673 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 OR5AK2Q8NH90 309 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 CDX2Q99626 313 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 GALNT9Q9HCQ5 603 aa16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 ING1Q9UK53 422 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-208ENST00000548436 ANKRD61A6NGH8 418 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 IFITM5A6NNB3 132 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 PITPNAQ00169 270 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 NTRK2Q16620 822 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 UBE2NLQ5JXB2 153 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 HACD4Q5VWC8 232 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 RHBDD2Q6NTF9 364 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 FAM199XQ6PEV8 388 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 TCTE3Q8IZS6 198 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 KLHL15Q96M94 604 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 TGIF2Q9GZN2 237 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 PLSCR3Q9NRY6 295 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 IKZF2Q9UKS7 526 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 CAMK2AQ9UQM7 478 aa16.75■□□□□ 0.27
PRPF40B-208ENST00000548436 AIPO00170 330 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 PDCD5O14737 125 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 ZNF354AO60765 605 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 TRIM3O75382 744 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 MT-ATP6P00846 226 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 CDK10Q15131 360 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 SGCBQ16585 318 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 FAM69AQ5T7M9 428 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 STPG1Q5TH74 334 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 THEM6Q8WUY1 208 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 METTL21AQ8WXB1 218 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 INTS14Q96SY0 518 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 AMELYQ99218 206 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 SLC7A5P2Q9GIP4 190 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 OR11A1Q9GZK7 315 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 TMEM165Q9HC07 324 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 PAQR5Q9NXK6 330 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 FAM172BPA6NC97 362 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 OR6C70A6NIJ9 312 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 ITGA10O75578 1167 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 TIAF1O95411 115 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 TCEA1P23193 301 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 DPP4P27487 766 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 CLDN12P56749 244 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 RRAS2P62070 204 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 BTG1P62324 171 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 ACKR1Q16570 336 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 Q499Y3 187 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 C1orf140Q5VVS0 124 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 OR5M10Q6IEU7 315 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 MTFR2Q6P444 385 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 TMEM71Q6P5X7 295 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 SIAH3Q8IW03 269 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 TOMM5Q8N4H5 51 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 APCDD1LQ8NCL9 501 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 GUCD1Q96NT3 240 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 FOXN4Q96NZ1 517 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 MCUBQ9NWR8 336 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms