RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 IGHV1-69-2A0A0G2JMI3 117 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 ZNF726A6NNF4 738 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 BPGMP07738 259 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 PRG2P13727 222 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 LBPP18428 481 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 CRYBB2P43320 205 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 KLF3P57682 345 aaPredicted RBP14.46□□□□□ -0.09
VPS29-204ENST00000548259 IL13RA1P78552 427 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 CCL8P80075 99 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 HFEQ30201 348 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 AVPI1Q5T686 147 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 NUDCD3Q8IVD9 361 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 OR52E6Q96RD3 313 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 C12orf10Q9HB07 376 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 SELENONQ9NZV5 590 aa14.46□□□□□ -0.09
VPS29-204ENST00000548259 MYEF2Q9P2K5 600 aaKnown RBP14.46□□□□□ -0.09
VPS29-204ENST00000548259 TRAV36DV7A0A075B6V5 113 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 A0A0G2JPF8 293 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 HNRNPCL2B2RXH8 293 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 HNRNPCL3B7ZW38 293 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 TRAF3IP2O43734 574 aaPredicted RBP14.45□□□□□ -0.1
VPS29-204ENST00000548259 HNRNPCL1O60812 293 aaKnown RBP14.45□□□□□ -0.1
VPS29-204ENST00000548259 SPAG7O75391 227 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 IGHV2-5P01817 119 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 SERPINA5P05154 406 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 BCHEP06276 602 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 HNRNPCL4P0DMR1 293 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 B4GALT1P15291 398 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 PRTN3P24158 256 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 GRPRP30550 384 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 CRATP43155 626 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 MAGEB1P43366 347 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 ALKBH6Q3KRA9 238 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 FAM209AQ5JX71 171 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 COX20Q5RI15 118 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 SERPINA11Q86U17 422 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 CLIP4Q8N3C7 705 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 CPEB3Q8NE35 698 aaKnown RBP14.45□□□□□ -0.1
VPS29-204ENST00000548259 SYNPRQ8TBG9 265 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 RNF217Q8TC41 542 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 ST7LQ8TDW4 575 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 C22orf15Q8WYQ4 148 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 C11orf40Q8WZ69 217 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 FOXB1Q99853 325 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 GAL3ST1Q99999 423 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 ASPNQ9BXN1 380 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 C1orf198Q9H425 327 aa14.45□□□□□ -0.1
VPS29-204ENST00000548259 RFXANKO14593 260 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 PTHP01270 115 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 DRD4P21917 467 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 DSTNP60981 165 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 EGR4Q05215 589 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 SLC3A1Q07837 685 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 RBBP4Q09028 425 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 C6orf89Q6UWU4 347 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 PIWIL3Q7Z3Z3 882 aaKnown RBP14.44□□□□□ -0.1
VPS29-204ENST00000548259 LSRQ86X29 649 aaPredicted RBP14.44□□□□□ -0.1
VPS29-204ENST00000548259 DNAJA4Q8WW22 397 aaPredicted RBP14.44□□□□□ -0.1
VPS29-204ENST00000548259 TAAR8Q969N4 342 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 EPYCQ99645 322 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 LRMDAQ9H2I8 198 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 UNKLQ9H9P5 680 aaKnown RBP14.44□□□□□ -0.1
VPS29-204ENST00000548259 SAP30LQ9HAJ7 183 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 CDH20Q9HBT6 801 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 SEC14L4Q9UDX3 406 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.44□□□□□ -0.1
VPS29-204ENST00000548259 WIPI2Q9Y4P8 454 aa14.44□□□□□ -0.1
VPS29-204ENST00000548259 FZD7O75084 574 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 DEAF1O75398 565 aaPredicted RBP14.43□□□□□ -0.1
VPS29-204ENST00000548259 FARS2O95363 451 aaKnown RBP14.43□□□□□ -0.1
VPS29-204ENST00000548259 ANP32DO95626 131 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 LCKP06239 509 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 ARAFP10398 606 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 RAB39AQ14964 217 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 ARMCX4Q5H9R4 360 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 USP51Q70EK9 711 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 DPPA2Q7Z7J5 298 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 ZNF781Q8N8C0 355 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 SCAIQ8N9R8 606 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 SYT14Q8NB59 555 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 SLC30A7Q8NEW0 376 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 ZNF519Q8TB69 540 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 SLC38A5Q8WUX1 472 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 SLC25A28Q96A46 364 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 ELMOD3Q96FG2 381 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 ZNF75AQ96N20 296 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 EMC6Q9BV81 110 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 MED29Q9NX70 200 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 RAP2CQ9Y3L5 183 aa14.43□□□□□ -0.1
VPS29-204ENST00000548259 FOXH1O75593 365 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 C1QCP02747 245 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 SERPINE1P05121 402 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 ETFAP13804 333 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 ZNF250P15622 560 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 CDKN2CP42773 168 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 CSNK1A1P48729 337 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 RPL14P50914 215 aaKnown RBP14.42□□□□□ -0.1
VPS29-204ENST00000548259 ATP4BP51164 291 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 AQP5P55064 265 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 NME5P56597 212 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms