RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 LRRC17Q8N6Y2 441 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 OR10A6Q8NH74 314 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 VANGL1Q8TAA9 524 aaPredicted RBP11.54□□□□□ -0.56
CPSF6-204ENST00000547486 TAMM41Q96BW9 452 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF442Q9H7R0 627 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 EVA1AQ9H8M9 152 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 MOV10Q9HCE1 1003 aaKnown RBP11.54□□□□□ -0.56
CPSF6-204ENST00000547486 TAS2R5Q9NYW4 299 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF224Q9NZL3 707 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 FKBP7Q9Y680 259 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 LOC390937A0A1W2PQ73 354 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 SH3PXD2BA1X283 911 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF726A6NNF4 738 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 C11orf98E9PRG8 122 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 NDUFS8O00217 210 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 ANGPT2O15123 496 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 CHP2O43745 196 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 CH25HO95992 272 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 MT-ATP6P00846 226 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 CD79AP11912 226 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF35P13682 527 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 IFNGR1P15260 489 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF14P17017 642 aaPredicted RBP11.53□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF16P17020 682 aaPredicted RBP11.53□□□□□ -0.56
CPSF6-204ENST00000547486 NPR2P20594 1047 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 NR4A1P22736 598 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 PPOXP50336 477 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 BIDP55957 195 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 NFYCQ13952 458 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF74Q16587 644 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 KRT80Q6KB66 452 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF813Q6ZN06 617 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 HDXQ7Z353 690 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 SPATA21Q7Z572 469 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 CCDC36Q8IYA8 594 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 OR6N1Q8NGY5 312 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 OR5J2Q8NH18 312 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 FGFBP3Q8TAT2 258 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 ADAMTS16Q8TE57 1224 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 TSPEARQ8WU66 669 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 MSI2Q96DH6 328 aaKnown RBP11.53□□□□□ -0.56
CPSF6-204ENST00000547486 PIMREGQ9BSJ6 248 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 SOX7Q9BT81 388 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 TRIM33Q9UPN9 1127 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 USP22Q9UPT9 525 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 POFUT2Q9Y2G5 429 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 SVEP1Q4LDE5 3571 aa11.53□□□□□ -0.56
CPSF6-204ENST00000547486 A0A0G2JND7 137 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 IFNA2P01563 188 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 PATE4P0C8F1 98 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 FAM157CP0CG43 387 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 ADORA3P0DMS8 318 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 B4GALT1P15291 398 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 ZP4Q12836 540 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 SNTB2Q13425 540 aaKnown RBP11.52□□□□□ -0.57
CPSF6-204ENST00000547486 DAG1Q14118 895 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 GSG1Q2KHT4 349 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 METTL21CQ5VZV1 264 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 NANOGP8Q6NSW7 305 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 LRFN4Q6PJG9 635 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 PATL1Q86TB9 770 aaKnown RBP11.52□□□□□ -0.57
CPSF6-204ENST00000547486 SKA3Q8IX90 412 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 CDK20Q8IZL9 346 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 IL17RDQ8NFM7 739 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 TMEM54Q969K7 222 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 PRSS27Q9BQR3 290 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 BEX2Q9BXY8 128 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 ULBP2Q9BZM5 246 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 BPESC1Q9GZL8 116 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 RAB1BQ9H0U4 201 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 NANOGQ9H9S0 305 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 TMEM160Q9NX00 188 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 SLC7A7Q9UM01 511 aa11.52□□□□□ -0.57
CPSF6-204ENST00000547486 YLPM1P49750 1951 aaKnown RBP11.52□□□□□ -0.57
CPSF6-204ENST00000547486 TRAPPC13A5PLN9 417 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 RNF212BA8MTL3 300 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 KPNA4O00629 521 aaPredicted RBP11.51□□□□□ -0.57
CPSF6-204ENST00000547486 LMX1BO60663 402 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 SASH3O75995 380 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 STAMBPO95630 424 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 ADRA2AP08913 450 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 DAOP14920 347 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 H2AFXP16104 143 aaPredicted RBP11.51□□□□□ -0.57
CPSF6-204ENST00000547486 PCGF2P35227 344 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 GIPRP48546 466 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 PTDSS1P48651 473 aaKnown RBP11.51□□□□□ -0.57
CPSF6-204ENST00000547486 GZMKP49863 264 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 RAB1AP62820 205 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 VMACQ2NL98 169 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 IQCCQ4KMZ1 466 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 RABL3Q5HYI8 236 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 TTC33Q6PID6 262 aaPredicted RBP11.51□□□□□ -0.57
CPSF6-204ENST00000547486 SLC35D2Q76EJ3 337 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 CCDC80Q76M96 950 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 OR6X1Q8NH79 312 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 FOXB1Q99853 325 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms