RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 TMEM154Q6P9G4 183 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF771Q7L3S4 317 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF627Q7L945 461 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 C20orf196Q8IYI0 205 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 BCL6BQ8N143 479 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-208ENST00000546534 CLIP4Q8N3C7 705 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 SYT14Q8NB59 555 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 OR52P1PQ8NH57 321 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF417Q8TAU3 575 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF587Q96SQ5 575 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-208ENST00000546534 ZMAT3Q9HA38 289 aaKnown RBP10.84□□□□□ -0.67
SCAF11-208ENST00000546534 NKIRAS2Q9NYR9 191 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF69Q9UC07 566 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 ZNF281Q9Y2X9 895 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 CACNG2Q9Y698 323 aa10.84□□□□□ -0.67
SCAF11-208ENST00000546534 CLDN25C9JDP6 229 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 TRAF3IP2O43734 574 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-208ENST00000546534 AKAP8O43823 692 aaKnown RBP10.83□□□□□ -0.68
SCAF11-208ENST00000546534 FZD7O75084 574 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 RAB36O95755 333 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 RNASE1P07998 156 aaKnown RBP10.83□□□□□ -0.68
SCAF11-208ENST00000546534 B4GALT1P15291 398 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 TEKQ02763 1124 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 BAMBIQ13145 260 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 MFSD13AQ14CX5 517 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 SMU1Q2TAY7 513 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 PCGF3Q3KNV8 242 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 LIN52Q52LA3 116 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 SPANXN4Q5MJ08 99 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 HIST2H2BDQ6DRA6 164 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 RGS7BPQ6MZT1 257 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-208ENST00000546534 USP51Q70EK9 711 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 TREML1Q86YW5 311 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 WDFY1Q8IWB7 410 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 TAAR8Q969N4 342 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 TESCQ96BS2 214 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF48Q96MX3 618 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-208ENST00000546534 CCDC115Q96NT0 180 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 GPA33Q99795 319 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 EMC6Q9BV81 110 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 DENND2DQ9H6A0 471 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-208ENST00000546534 SLC17A7Q9P2U7 560 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 SLC7A8Q9UHI5 535 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 GPR160Q9UJ42 338 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 NUP50Q9UKX7 468 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 POFUT2Q9Y2G5 429 aa10.83□□□□□ -0.68
SCAF11-208ENST00000546534 PRKDCP78527 4128 aaKnown RBP10.83□□□□□ -0.68
SCAF11-208ENST00000546534 IGLV3-9A0A075B6K5 115 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 LOC102725191A0A1B0GVB3 256 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 AIM2O14862 343 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 PATE4P0C8F1 98 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 FAM157BP0CG42 384 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 HLA-DOBP13765 273 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 MDKP21741 143 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 LSP1P33241 339 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 ANXA11P50995 505 aaKnown RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 KLF3P57682 345 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 SELENOVP59797 346 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 TXNL4AP83876 142 aaKnown RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 KLF17Q5JT82 389 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 LEG1Q6P5S2 330 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 H1FNTQ75WM6 255 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 SERPINA11Q86U17 422 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF584Q8IVC4 421 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 DEFB108BQ8NET1 73 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 FGFBP3Q8TAT2 258 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 PNPT1Q8TCS8 783 aaKnown RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 SNX33Q8WV41 574 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 GTF3AQ92664 365 aaKnown RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 RAB1CQ92928 201 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 SLC25A28Q96A46 364 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 TIMD4Q96H15 378 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 LRR1Q96L50 414 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 PPP1R36Q96LQ0 422 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 GAL3ST1Q99999 423 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 AKTIPQ9H8T0 292 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 PLEK2Q9NYT0 353 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF443Q9Y2A4 671 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-208ENST00000546534 CHST2Q9Y4C5 530 aa10.82□□□□□ -0.68
SCAF11-208ENST00000546534 ARHGAP32A7KAX9 2087 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 SLC22A23A1A5C7 686 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 MS4A18H0YCH9 400 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 TPD52L2O43399 206 aaKnown RBP10.81□□□□□ -0.68
SCAF11-208ENST00000546534 UBL3O95164 117 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 HPRP00739 348 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 SERPINA5P05154 406 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 ZNF250P15622 560 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 CBLP22681 906 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 GRPRP30550 384 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 GCH1P30793 250 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 S100A3P33764 101 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 SERPINB5P36952 375 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 ERVS71-1P61550 626 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 HOXC5Q00444 222 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 SRSF4Q08170 494 aaKnown RBP10.81□□□□□ -0.68
SCAF11-208ENST00000546534 HFEQ30201 348 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 MS4A18Q3C1V0 323 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 ARMCX4Q5H9R4 360 aa10.81□□□□□ -0.68
SCAF11-208ENST00000546534 FAM69AQ5T7M9 428 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms