RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 CDKN1AP38936 164 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 NR4A2P43354 598 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CLK3P49761 638 aaKnown RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 RORCP51449 518 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 PNLIPRP1P54315 467 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 TAS2R39P59534 338 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 VBP1P61758 197 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 RPS15AP62244 130 aaKnown RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 RPS4XP62701 263 aaKnown RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 ARHGAP19Q14CB8 494 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 IMPG1Q17R60 797 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CTU2Q2VPK5 515 aaKnown RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF791Q3KP31 576 aaPredicted RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 TBRG1Q3YBR2 411 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 DEFB134Q4QY38 66 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 ATP6AP1LQ52LC2 224 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 UNC50Q53HI1 259 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CTSL3PQ5NE16 218 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 FNDC7Q5VTL7 733 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 MEDAGQ5VYS4 303 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 MRNIPQ6NTE8 343 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CRIP3Q6Q6R5 217 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF474Q6S9Z5 364 aaPredicted RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 ISCA2Q86U28 154 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 TCAIMQ8N3R3 496 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 NKAPQ8N5F7 415 aaKnown RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 SEMA6DQ8NFY4 1073 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 OR5T2Q8NGG2 359 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 OR9Q1Q8NGQ5 310 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 OR10Z1Q8NGY1 313 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 LILRB1Q8NHL6 650 aaPredicted RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 SGMS2Q8NHU3 365 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 PAQR8Q8TEZ7 354 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 SLC25A43Q8WUT9 341 aaPredicted RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 FIG4Q92562 907 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 PYURFQ96I23 114 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 METTL2AQ96IZ6 378 aaKnown RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 ZNF382Q96SR6 550 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 PKP4Q99569 1192 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 EPYCQ99645 322 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 MED18Q9BUE0 208 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CDCA4Q9BXL8 241 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 C6orf62Q9GZU0 229 aaPredicted RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 OR51B5Q9H339 312 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 PIGUQ9H490 435 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 RNF121Q9H920 327 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CAB39LQ9H9S4 337 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 IL1RAPQ9NPH3 570 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 C12orf4Q9NQ89 552 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 ZC4H2Q9NQZ6 224 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CHRAC1Q9NRG0 131 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 PAQR5Q9NXK6 330 aaPredicted RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CLCF1Q9UBD9 225 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 NDRG3Q9UGV2 375 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 ING4Q9UNL4 249 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CORO2BQ9UQ03 480 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CAMK2AQ9UQM7 478 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 LAMP3Q9UQV4 416 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 SLC6A5Q9Y345 797 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 FKBP7Q9Y680 259 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 CHCHD2Q9Y6H1 151 aaPredicted RBP5.9□□□□□ -1.46
CCDC60-205ENST00000546345 SESN1Q9Y6P5 492 aa5.9□□□□□ -1.46
CCDC60-205ENST00000546345 A0A1B0GW55 424 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 A0A1W2PNV4 684 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 ARRDC5A6NEK1 342 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 PTGES3LE9PB15 166 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 NPIPB8E9PQR5 432 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 RNASET2O00584 256 aaKnown RBP5.89□□□□□ -1.47
CCDC60-205ENST00000546345 ORC5O43913 435 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 OR10H2O60403 315 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 ZFAND5O76080 213 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 OR7A10O76100 309 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 RCBTB2O95199 551 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 IL1AP01583 271 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 P04436 131 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 HMGN1P05114 100 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 DUX4L2P0CJ85 424 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 DUX4L3P0CJ86 424 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 DUX4L4P0CJ87 422 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 DUX4L5P0CJ88 424 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 DUX4L6P0CJ89 424 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 DUX4L7P0CJ90 424 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 ANXA8P13928 327 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 IL7RP16871 459 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 GDF1P27539 372 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 IMPA1P29218 277 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 CD79BP40259 229 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 HTR2BP41595 481 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 YAP1P46937 504 aaKnown RBP5.89□□□□□ -1.47
CCDC60-205ENST00000546345 BLVRAP53004 296 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 MAPK12P53778 367 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 RAG2P55895 527 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 TBPL1P62380 186 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 CRADDP78560 199 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 ABATP80404 500 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 ACVR1Q04771 509 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 SCRN3Q0VDG4 424 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 CSHL1Q14406 222 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 QPRTQ15274 297 aa5.89□□□□□ -1.47
CCDC60-205ENST00000546345 MAPK11Q15759 364 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms