RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TBX5Q99593 518 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 HCAR1Q9BXC0 346 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 SLC17A9Q9BYT1 436 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 POTEKPQ9BYX7 375 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 COMMD4Q9H0A8 199 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 SHARPINQ9H0F6 387 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 SLC6A15Q9H2J7 730 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 C1orf198Q9H425 327 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 MED20Q9H944 212 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 Q9N2J8 555 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 ADAP2Q9NPF8 381 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 NOX4Q9NPH5 578 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 ZC4H2Q9NQZ6 224 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 MBNL1Q9NR56 388 aaKnown RBP5.9□□□□□ -1.46
SNHG1-225ENST00000545920 TM7SF3Q9NS93 570 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 RXFP3Q9NSD7 469 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 C20orf141Q9NUB4 165 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 SDHAF2Q9NX18 166 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 PIPOXQ9P0Z9 390 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 STEAP1Q9UHE8 339 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 GNG8Q9UK08 70 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 PILRAQ9UKJ1 303 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 RCE1Q9Y256 329 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 MRPS33Q9Y291 106 aaKnown RBP5.9□□□□□ -1.46
SNHG1-225ENST00000545920 PLEKHA6Q9Y2H5 1048 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 NTNG1Q9Y2I2 539 aa5.9□□□□□ -1.46
SNHG1-225ENST00000545920 MRPS7Q9Y2R9 242 aaKnown RBP5.9□□□□□ -1.46
SNHG1-225ENST00000545920 CCDC88CQ9P219 2028 aa5.9□□□□□ -1.47
SNHG1-225ENST00000545920 TRAV27A0A087WT01 109 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 A0A0J9YY10 115 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 PRSS38A1L453 326 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 TMEM200CA6NKL6 621 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 ANXA2P2A6NMY6 339 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 HIDE1A8MVS5 230 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 C2orf74A8MZ97 194 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 F5H5P2 479 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 TEX46H3BTG2 121 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 CYR61O00622 381 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 AQP7O14520 342 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 ARPC1BO15143 372 aaKnown RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 P2RX6O15547 441 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 SIGLEC6O43699 453 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 NUDT21O43809 227 aaKnown RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 CDC40O60508 579 aaKnown RBP eCLIP5.89□□□□□ -1.472e-10■□□□□ 8.9
SNHG1-225ENST00000545920 SRPX2O60687 465 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 PRAMEF2O60811 474 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 TSPAN9O75954 239 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 RASGRP1O95267 797 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 HPXP02790 462 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 ANXA2P07355 339 aaKnown RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 SYPP08247 313 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 CD14P08571 375 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 MRPL3P09001 348 aaKnown RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 HOXD4P09016 255 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 FGF2P09038 288 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 ANKRD34CP0C6C1 535 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 ACSM4P0C7M7 580 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 JMJD7P0C870 316 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 GKN3PP0CG01 181 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 AKAIN1P0CW23 69 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 CD37P11049 281 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 CCL5P13501 91 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 GABRA1P14867 456 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 HIST1H1CP16403 213 aaKnown RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 MGMTP16455 207 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 NAGAP17050 411 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 MPZP25189 248 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 CSF2RBP32927 897 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 GABRA3P34903 492 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 CTNNB1P35222 781 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 VEGFCP49767 419 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 VSX2P58304 361 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 TAS2R20P59543 309 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 YPEL5P62699 121 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 IGLV3-21P80748 117 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 CRYZQ08257 329 aaKnown RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 HTR4Q13639 388 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 FHL1Q13642 323 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 RUNX2Q13950 521 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 ZNF345Q14585 488 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 NFATC4Q14934 902 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 DEFB115Q30KQ5 88 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 TP53I3Q53FA7 332 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 FAM27D1Q5T7N8 215 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 WBP2NLQ6ICG8 309 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 SLC25A25Q6KCM7 469 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 FAHD2BQ6P2I3 314 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 FBXO42Q6P3S6 717 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 VITQ6UXI7 678 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 APOOLQ6UXV4 268 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 TFAP2EQ6VUC0 442 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 STAC2Q6ZMT1 411 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 UTS2BQ765I0 119 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 FAM214BQ7L5A3 538 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 OLIG3Q7RTU3 272 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 SLC36A1Q7Z2H8 476 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 MEX3DQ86XN8 651 aaKnown RBP5.89□□□□□ -1.47
SNHG1-225ENST00000545920 SLC38A6Q8IZM9 456 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 OR5M9Q8NGP3 310 aa5.89□□□□□ -1.47
SNHG1-225ENST00000545920 OR51A7Q8NH64 312 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms