RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 SGK3Q96BR1 496 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 ZMYND19Q96E35 227 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 ELOVL3Q9HB03 270 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 LANCL2Q9NS86 450 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 MYOTQ9UBF9 498 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 NPFFR2Q9Y5X5 522 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SPTY2D1-AS1A0A0U1RR47 76 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 TARM1B6A8C7 271 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 NME4O00746 187 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SUSD5O60279 629 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 CRTAPO75718 401 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SERPINE2P07093 398 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SLC2A5P22732 501 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 ARRB2P32121 409 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 GFERP55789 205 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 EDDM3BP56851 147 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SQSTM1Q13501 440 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 AANATQ16613 207 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 GAB4Q2WGN9 574 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SOWAHCQ53LP3 525 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 KANK2Q63ZY3 851 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 MS4A15Q8N5U1 240 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 POGLUT1Q8NBL1 392 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 APOBEC4Q8WW27 367 aaKnown RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 INTS14Q96SY0 518 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 NRTNQ99748 197 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 MS4A7Q9GZW8 240 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 OR51E2Q9H255 320 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 ADAM29Q9UKF5 820 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 MIA3Q5JRA6 1907 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 PATJQ8NI35 1801 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 A0A0G2JMP0 313 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 A0A1B0GTL3 188 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 TSPAN11A1L157 253 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 OR7A17O14581 309 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 KIAA0513O60268 411 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SNAPC5O75971 98 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 JUNBP17275 347 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SDC1P18827 310 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 DUSP2Q05923 314 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 TRA2AQ13595 282 aaKnown RBP eCLIP7.92□□□□□ -1.143e-12■■■■□ 21.3
CLIP1-218ENST00000545889 RGNQ15493 299 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 GRK1Q15835 563 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 XAF1Q6GPH4 301 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 CYHR1Q6ZMK1 362 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 CPEB2Q7Z5Q1 589 aaKnown RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SCCPDHQ8NBX0 429 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 OR4N2Q8NGD1 307 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 NEIL3Q8TAT5 605 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 BPIFA2Q96DR5 249 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 TNFRSF12AQ9NP84 129 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 CNIH4Q9P003 139 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 PIKFYVEQ9Y2I7 2098 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 FABP7O15540 132 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 UTS2O95399 124 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 GTF2F2P13984 249 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 EDN3P14138 238 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 G0S2P27469 103 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 GZMKP49863 264 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 IDH3GP51553 393 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 AGFG1P52594 562 aaKnown RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 DEFA6Q01524 100 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 FGL1Q08830 312 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 RAB31Q13636 194 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF750Q32MQ0 723 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 CDNFQ49AH0 187 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM244Q5VVB8 128 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TBPL2Q6SJ96 375 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SSX9Q7RTT3 188 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ZFP82Q8N141 532 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF680Q8NEM1 530 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 DYNC2LI1Q8TCX1 351 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 PSMF1Q92530 271 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 DCLRE1CQ96SD1 692 aaKnown RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF471Q9BX82 626 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 POTEKPQ9BYX7 375 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SLC6A20Q9NP91 592 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 BIN3Q9NQY0 253 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ACSS1Q9NUB1 689 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 PLEKHJ1Q9NW61 149 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SDHAF2Q9NX18 166 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 FBXL3Q9UKT7 428 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SLC22A7Q9Y694 548 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 D6RAR5 112 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 FBXO45P0C2W1 286 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 C7P10643 843 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 NDUFB7P17568 137 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 F2RL1P55085 397 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TRAM1Q15629 374 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SMN1Q16637 294 aaKnown RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 OR6M1Q8NGM8 313 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SLC25A43Q8WUT9 341 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TOMM40LQ969M1 308 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 OR7D2Q96RA2 312 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 RNF167Q9H6Y7 350 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 PLEKHA3Q9HB20 300 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SEC14L4Q9UDX3 406 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 PCDHGA9Q9Y5G4 932 aaKnown RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 CUL9Q8IWT3 2517 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 CXorf51AA0A1B0GTR3 108 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms