RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 NXF5Q9H1B4 397 aaKnown RBP13.68□□□□□ -0.22
USP28-214ENST00000545540 DHCR7Q9UBM7 475 aaKnown RBP13.68□□□□□ -0.22
USP28-214ENST00000545540 LAMP5Q9UJQ1 280 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 PCOLCE2Q9UKZ9 415 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 M0R233 179 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 AIPO00170 330 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 ARPC5O15511 151 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 TNFP01375 233 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 RPL18Q07020 188 aaKnown RBP13.68□□□□□ -0.22
USP28-214ENST00000545540 EIF2B5Q13144 721 aaKnown RBP13.68□□□□□ -0.22
USP28-214ENST00000545540 CBFBQ13951 182 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 EXOSC6Q5RKV6 272 aaKnown RBP13.68□□□□□ -0.22
USP28-214ENST00000545540 B3GNTL1Q67FW5 361 aaPredicted RBP13.68□□□□□ -0.22
USP28-214ENST00000545540 SLITRK4Q8IW52 837 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 LSMEM1Q8N8F7 131 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 SORCS2Q96PQ0 1159 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 FOXJ3Q9UPW0 622 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 OR5K3A6NET4 321 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 ANXA2P2A6NMY6 339 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 C17orf105B2RV13 164 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 LGALS8O00214 317 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 OR7A10O76100 309 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 SEMA4FO95754 770 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 ANXA2P07355 339 aaKnown RBP13.67□□□□□ -0.22
USP28-214ENST00000545540 GABRG2P18507 467 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 CXCL2P19875 107 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 PSMA6P60900 246 aaKnown RBP13.67□□□□□ -0.22
USP28-214ENST00000545540 POU4F2Q12837 409 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 PCGF3Q3KNV8 242 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 TMEM205Q6UW68 189 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 DPY19L2P2Q6ZN68 376 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 COQ8AQ8NI60 647 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 ELSPBP1Q96BH3 223 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 OBP2AQ9NY56 170 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 KLHL9Q9P2J3 617 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 ATXN7L1Q9ULK2 861 aaPredicted RBP13.67□□□□□ -0.22
USP28-214ENST00000545540 ZNF337Q9Y3M9 751 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 A0A1B0GVI7 797 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 CTNSO60931 367 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 MPZL1O95297 269 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 WNT11O96014 354 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 AKT2P31751 481 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 CCKBRP32239 447 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 TNFRSF4P43489 277 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 ANGPT1Q15389 498 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 LINC00114Q6XXX2 140 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 NDUFAF7Q7L592 441 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 ZNF550Q7Z398 422 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 RDH8Q9NYR8 311 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 GRHPRQ9UBQ7 328 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 CLDN16Q9Y5I7 305 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 HCRTR2O43614 444 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 RNH1P13489 461 aaKnown RBP13.67□□□□□ -0.22
USP28-214ENST00000545540 TACR3P29371 465 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 C19orf57Q0VDD7 668 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 WDR45BQ5MNZ6 344 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 SLC22A10Q63ZE4 541 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 BIVMQ86UB2 503 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 NKD1Q969G9 470 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 TAAR8Q969N4 342 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 TOE1Q96GM8 510 aaKnown RBP13.67□□□□□ -0.22
USP28-214ENST00000545540 SFXN2Q96NB2 322 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 B3GNT2Q9NY97 397 aa13.67□□□□□ -0.22
USP28-214ENST00000545540 GPR3P46089 330 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 GPR143P51810 404 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 TAS2R20P59543 309 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 HSF2Q03933 536 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 HTR4Q13639 388 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 FBXO46Q6PJ61 603 aaPredicted RBP13.66□□□□□ -0.22
USP28-214ENST00000545540 OVCH1Q7RTY7 1134 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 CDH24Q86UP0 819 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 SYS1Q8N2H4 156 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 C19orf47Q8N9M1 422 aaKnown RBP13.66□□□□□ -0.22
USP28-214ENST00000545540 POMGNT2Q8NAT1 580 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 THAP3Q8WTV1 239 aaPredicted RBP13.66□□□□□ -0.22
USP28-214ENST00000545540 TSEN15Q8WW01 171 aaKnown RBP13.66□□□□□ -0.22
USP28-214ENST00000545540 PMEPA1Q969W9 287 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 FRYQ5TBA9 3013 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 TRAV18A0A075B6X5 111 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 FXYD6-FXYD2A0A087WZ82 144 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 CDC40O60508 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP28-214ENST00000545540 UPK3AO75631 287 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 GLCEO94923 617 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 ZP2Q05996 745 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 MESTQ5EB52 335 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 TTLL10Q6ZVT0 673 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 MARCH3Q86UD3 253 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 MS4A7Q9GZW8 240 aaPredicted RBP13.66□□□□□ -0.22
USP28-214ENST00000545540 FXYD6Q9H0Q3 95 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 TMEM138Q9NPI0 162 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 BAIAP2Q9UQB8 552 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 SDK2Q58EX2 2172 aa13.66□□□□□ -0.22
USP28-214ENST00000545540 OPN1LWP04000 364 aa13.65□□□□□ -0.22
USP28-214ENST00000545540 ART1P52961 327 aa13.65□□□□□ -0.22
USP28-214ENST00000545540 FAM220AQ7Z4H9 259 aa13.65□□□□□ -0.22
USP28-214ENST00000545540 MOKQ9UQ07 419 aa13.65□□□□□ -0.22
USP28-214ENST00000545540 RPS10-NUDT3A0A1W2PQS6 291 aa13.65□□□□□ -0.22
USP28-214ENST00000545540 AK1P00568 194 aa13.65□□□□□ -0.22
USP28-214ENST00000545540 VSIG10L2P0DP72 767 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms