RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 B3GNT2Q9NY97 397 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 ZNF224Q9NZL3 707 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 SLC7A7Q9UM01 511 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 USP22Q9UPT9 525 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 ATRQ13535 2644 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 VWC2LB2RUY7 222 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 C11orf98E9PRG8 122 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 KPNA4O00629 521 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-210ENST00000545493 HLA-HP01893 362 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 B4GALT1P15291 398 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 ZNF16P17020 682 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-210ENST00000545493 AHCYP23526 432 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 PPOXP50336 477 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 RABL3Q5HYI8 236 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 METTL21CQ5VZV1 264 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 REP15Q6BDI9 236 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 ZNF813Q6ZN06 617 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 CCDC80Q76M96 950 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 SLC46A3Q7Z3Q1 461 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 CALHM3Q86XJ0 350 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 PROX1Q92786 737 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 ULBP2Q9BZM5 246 aa18.29■□□□□ 0.52
SCARB1-210ENST00000545493 TRAPPC13A5PLN9 417 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 A8MV72 311 aaPredicted RBP18.28■□□□□ 0.52
SCARB1-210ENST00000545493 ADORA3P0DMS8 318 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 IFNGR1P15260 489 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 THBS4P35443 961 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 INTS11Q5TA45 600 aaKnown RBP18.28■□□□□ 0.52
SCARB1-210ENST00000545493 NANOGP8Q6NSW7 305 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 MS4A3Q96HJ5 214 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 ZNF75AQ96N20 296 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 PRSS27Q9BQR3 290 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 NANOGQ9H9S0 305 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 B3GAT2Q9NPZ5 323 aa18.28■□□□□ 0.52
SCARB1-210ENST00000545493 CH25HO95992 272 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 IGHV4-31P0DP07 118 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 CSNK1A1P48729 337 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 PDLIM4P50479 330 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 BIDP55957 195 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 SNTB2Q13425 540 aaKnown RBP18.27■□□□□ 0.52
SCARB1-210ENST00000545493 MELKQ14680 651 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 COQ5Q5HYK3 327 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 TTC33Q6PID6 262 aaPredicted RBP18.27■□□□□ 0.52
SCARB1-210ENST00000545493 HIPK1Q86Z02 1210 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 CCDC36Q8IYA8 594 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 LRRC17Q8N6Y2 441 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 OR8J3Q8NGG0 315 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 OR6N1Q8NGY5 312 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 FOXB1Q99853 325 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 VRK1Q99986 396 aaPredicted RBP18.27■□□□□ 0.52
SCARB1-210ENST00000545493 FGFR1OP2Q9NVK5 253 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 TAS2R5Q9NYW4 299 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 POFUT2Q9Y2G5 429 aa18.27■□□□□ 0.52
SCARB1-210ENST00000545493 MXRA5Q9NR99 2828 aa18.27■□□□□ 0.51
SCARB1-210ENST00000545493 ANK2Q01484 3957 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 ZNF726A6NNF4 738 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 hCG_2039718K7EN88 272 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 IGFBP1P08833 259 aaPredicted RBP18.26■□□□□ 0.51
SCARB1-210ENST00000545493 ASAH2BP0C7U1 165 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 ZNF14P17017 642 aaPredicted RBP18.26■□□□□ 0.51
SCARB1-210ENST00000545493 TNFRSF1BP20333 461 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 USF1P22415 310 aaPredicted RBP18.26■□□□□ 0.51
SCARB1-210ENST00000545493 SF3A3Q12874 501 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCARB1-210ENST00000545493 MSMPQ1L6U9 139 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 GSG1Q2KHT4 349 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 KRT80Q6KB66 452 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 SLC35D2Q76EJ3 337 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 SVOPLQ8N434 492 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 SLC26A7Q8TE54 656 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 TMEM54Q969K7 222 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 LRRC58Q96CX6 371 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 MPP4Q96JB8 637 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 PIMREGQ9BSJ6 248 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 SLC19A3Q9BZV2 496 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 MEPEQ9NQ76 525 aaPredicted RBP18.26■□□□□ 0.51
SCARB1-210ENST00000545493 NANSQ9NR45 359 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 ZNF229Q9UJW7 825 aa18.26■□□□□ 0.51
SCARB1-210ENST00000545493 TMEM129A0AVI4 362 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 NDUFS8O00217 210 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 MRASO14807 208 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 CD79AP11912 226 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 NPR2P20594 1047 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 NR4A2P43354 598 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 UGT2B15P54855 530 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 ZP4Q12836 540 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 KLF10Q13118 480 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 CYLC2Q14093 348 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-210ENST00000545493 GGTLC2Q14390 218 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 SPATA21Q7Z572 469 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 CARM1Q86X55 608 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 CDK20Q8IZL9 346 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 OR6X1Q8NH79 312 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 RASSF5Q8WWW0 418 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 MYOZ1Q9NP98 299 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-210ENST00000545493 SAR1AQ9NR31 198 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 RTTNQ86VV8 2226 aa18.25■□□□□ 0.51
SCARB1-210ENST00000545493 IGHV4-61A0A0C4DH41 118 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 BBIP1A8MTZ0 92 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 RNF13O43567 381 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 OR6A2O95222 327 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms