RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 IFNW1P05000 195 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 IFNGR1P15260 489 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 CSNK1A1P48729 337 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 FABP6P51161 128 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 CARD17Q5XLA6 110 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 SLC35D2Q76EJ3 337 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 ZNF627Q7L945 461 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 HDDC2Q7Z4H3 204 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 GEMIN6Q8WXD5 167 aaKnown RBP20.29■□□□□ 0.84
CHFR-222ENST00000544093 TXNDC15Q96J42 360 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 COX4I2Q96KJ9 171 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 ULBP2Q9BZM5 246 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 SPAG4Q9NPE6 437 aa20.29■□□□□ 0.84
CHFR-222ENST00000544093 IGHV1-18A0A0C4DH31 117 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 SHOX2O60902 331 aaPredicted RBP20.28■□□□□ 0.84
CHFR-222ENST00000544093 IGKV3-15P01624 115 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 IGLV1-44P01699 117 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 CD8AP01732 235 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 ARR3P36575 388 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 GSK3BP49841 420 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 BIDP55957 195 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 CAMK2DQ13557 499 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 CBLL1Q75N03 491 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 SLC46A3Q7Z3Q1 461 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 NKAIN4Q8IVV8 208 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 LRRC17Q8N6Y2 441 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 IL17RDQ8NFM7 739 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 TMEM255BQ8WV15 326 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 LIPHQ8WWY8 451 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 SGTBQ96EQ0 304 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 KCTD14Q9BQ13 255 aaPredicted RBP20.28■□□□□ 0.84
CHFR-222ENST00000544093 POFUT2Q9Y2G5 429 aa20.28■□□□□ 0.84
CHFR-222ENST00000544093 NF1P21359 2839 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 ATP6V1G2-DDX39BF2Z307 99 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 OR7A10O76100 309 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 ZNF682O95780 498 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 CBR1P16152 277 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 FUT1P19526 365 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 APOBEC3AP31941 199 aaPredicted RBP20.27■□□□□ 0.84
CHFR-222ENST00000544093 CDKN1AP38936 164 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 PSME3P61289 254 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 GNGT1P63211 74 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 CHRNB3Q05901 458 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 IFI44LQ53G44 452 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 OFCC1Q8IZS5 231 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 NANOS1Q8WY41 292 aaKnown RBP20.27■□□□□ 0.84
CHFR-222ENST00000544093 ZNF566Q969W8 418 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 SLC25A44Q96H78 314 aaPredicted RBP20.27■□□□□ 0.84
CHFR-222ENST00000544093 DENND2DQ9H6A0 471 aaPredicted RBP20.27■□□□□ 0.84
CHFR-222ENST00000544093 STX18Q9P2W9 335 aaKnown RBP20.27■□□□□ 0.84
CHFR-222ENST00000544093 MOKQ9UQ07 419 aa20.27■□□□□ 0.84
CHFR-222ENST00000544093 NIPBLQ6KC79 2804 aaeCLIP20.26■□□□□ 0.83
CHFR-222ENST00000544093 A0A1W2PRG6 482 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 CENPBD1B2RD01 187 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 BLOC1S5-TXNDC5H3BN57 136 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 BCL10O95999 233 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 UGT2B15P54855 530 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 PHYHD1Q5SRE7 291 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 B3GLCTQ6Y288 498 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 ZNF837Q96EG3 531 aaPredicted RBP20.26■□□□□ 0.83
CHFR-222ENST00000544093 FNDC11Q9BVV2 318 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 GLTPQ9NZD2 209 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 RPS6KA6Q9UK32 745 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 A4GNTQ9UNA3 340 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 ARL2BPQ9Y2Y0 163 aa20.26■□□□□ 0.83
CHFR-222ENST00000544093 H7C1Q1 480 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 GMNNO75496 209 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 CECR9P0C854 216 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 CAPZA2P47755 286 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 DAP3P51398 398 aaKnown RBP20.25■□□□□ 0.83
CHFR-222ENST00000544093 NAAAQ02083 359 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 CLEC12BQ2HXU8 276 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 C11orf71Q6IPW1 123 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 ZNF813Q6ZN06 617 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 FKBP9P1Q75LS8 142 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 VTCN1Q7Z7D3 282 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 OR4F15Q8NGB8 312 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 PFN4Q8NHR9 129 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 TMEM54Q969K7 222 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 FAM162AQ96A26 154 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 FOXB1Q99853 325 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 FBXL3Q9UKT7 428 aa20.25■□□□□ 0.83
CHFR-222ENST00000544093 NPIPB13A6NJU9 1138 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 NPIPB4C9JG80 1138 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 DCTN3O75935 186 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 SERPINA1P01009 418 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 IGHG1P01857 330 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 TUBA1BP68363 451 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 TUBA4AP68366 448 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 RPL18Q07020 188 aaKnown RBP20.24■□□□□ 0.83
CHFR-222ENST00000544093 TRAM2Q15035 370 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 TUBA1AQ71U36 451 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 PIWIL3Q7Z3Z3 882 aaKnown RBP20.24■□□□□ 0.83
CHFR-222ENST00000544093 CYP4Z1Q86W10 505 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 LRRC37BQ96QE4 947 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 CACNG6Q9BXT2 260 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 C20orf141Q9NUB4 165 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 FBXO9Q9UK97 447 aaPredicted RBP20.24■□□□□ 0.83
CHFR-222ENST00000544093 PMF1-BGLAPU3KQ54 211 aa20.24■□□□□ 0.83
CHFR-222ENST00000544093 TRIM64A6NGJ6 449 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms