RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 A0A1W2PNR3 127 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 A0A1W2PNV4 684 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 LRRTM2O43300 516 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 ZNF17P17021 662 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 CD96P40200 585 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 GPR50Q13585 617 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 MELKQ14680 651 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 TMPRSS7Q7RTY8 843 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 PXKQ7Z7A4 578 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 ASB10Q8WXI3 467 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 TMEM203Q969S6 136 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 C4orf36Q96KX1 117 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 C5orf34Q96MH7 638 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 NUAK2Q9H093 628 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 DEPPQ9NTK1 212 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 LRFN1Q9P244 771 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 COPS3Q9UNS2 423 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 FKBP7Q9Y680 259 aa17.8■□□□□ 0.44
COPS7A-218ENST00000543939 MED12Q93074 2177 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 OR2M5A3KFT3 312 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 A6NIZ1 184 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 LRRC3CA6NJW4 275 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 SLC30A4O14863 429 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 CELP19835 753 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 SRD5A2P31213 254 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 SFTPDP35247 375 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 CAPZA2P47755 286 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 DAP3P51398 398 aaKnown RBP17.79■□□□□ 0.44
COPS7A-218ENST00000543939 P2RY4P51582 365 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 OR2B6P58173 313 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 OR12D2P58182 307 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 RAP1BP61224 184 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 RAP1AP62834 184 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 HSF1Q00613 529 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 ZNF239Q16600 458 aaKnown RBP17.79■□□□□ 0.44
COPS7A-218ENST00000543939 RAET1LQ5VY80 246 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 VASNQ6EMK4 673 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 CD200R1LQ6Q8B3 271 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 NHLRC1Q6VVB1 395 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 VASH1Q7L8A9 365 aaPredicted RBP17.79■□□□□ 0.44
COPS7A-218ENST00000543939 SLC16A9Q7RTY1 509 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 TIGD4Q8IY51 512 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 TRIM36Q9NQ86 728 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 TXNL4BQ9NX01 149 aaKnown RBP17.79■□□□□ 0.44
COPS7A-218ENST00000543939 ABI3Q9P2A4 366 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 B3GAT1Q9P2W7 334 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 TRAPPC4Q9Y296 219 aa17.79■□□□□ 0.44
COPS7A-218ENST00000543939 SIRT4Q9Y6E7 314 aaPredicted RBP17.79■□□□□ 0.44
COPS7A-218ENST00000543939 SLC22A23A1A5C7 686 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 NPIPA5E9PKD4 350 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 ZNF670-ZNF695F2Z2N8 137 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 J3QLW9 94 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 INHBBP09529 407 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 IFNGR1P15260 489 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 ZNF19P17023 458 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 CNR1P21554 472 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 HSF2Q03933 536 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 RUNX1T1Q06455 604 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 DYNC1I2Q13409 638 aaKnown RBP17.78■□□□□ 0.44
COPS7A-218ENST00000543939 MOGQ16653 247 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 CDONQ4KMG0 1287 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 TUBA3EQ6PEY2 450 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 SLC35D2Q76EJ3 337 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 ASCL5Q7RTU5 278 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 SYS1Q8N2H4 156 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 CLEC1AQ8NC01 280 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 MIB2Q96AX9 1013 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 TM9SF2Q99805 663 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 MARCH7Q9H992 704 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 CCDC59Q9P031 241 aaKnown RBP17.78■□□□□ 0.44
COPS7A-218ENST00000543939 NPIPA1Q9UND3 350 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 B9D1Q9UPM9 204 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 CNOT1A5YKK6 2376 aaKnown RBP17.78■□□□□ 0.44
COPS7A-218ENST00000543939 E9PI62 339 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 NEURL1O76050 574 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 F10P00742 488 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 LIPCP11150 499 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 CASRP41180 1078 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 ACTA2P62736 377 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 ACTG2P63267 376 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 POU3F1Q03052 451 aaPredicted RBP17.78■□□□□ 0.44
COPS7A-218ENST00000543939 ATP1A1-AS1Q5TC04 95 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 FAM205BPQ63HN1 556 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 SPINK14Q6IE38 97 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 LINC00299Q6ZSB3 139 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 TMPPEQ6ZT21 453 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 THAP4Q8WY91 577 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 PIGQQ9BRB3 760 aa17.78■□□□□ 0.44
COPS7A-218ENST00000543939 UTP23Q9BRU9 249 aaKnown RBP17.78■□□□□ 0.44
COPS7A-218ENST00000543939 RIF1Q5UIP0 2472 aaKnown RBP17.77■□□□□ 0.44
COPS7A-218ENST00000543939 TRDV1A0A1B0GX56 115 aa17.77■□□□□ 0.44
COPS7A-218ENST00000543939 METTL15A6NJ78 407 aa17.77■□□□□ 0.44
COPS7A-218ENST00000543939 PMS2P2O95744 297 aa17.77■□□□□ 0.44
COPS7A-218ENST00000543939 B3GALT5-AS1P59052 145 aa17.77■□□□□ 0.44
COPS7A-218ENST00000543939 TAS2R43P59537 309 aa17.77■□□□□ 0.44
COPS7A-218ENST00000543939 GPR85P60893 370 aa17.77■□□□□ 0.44
COPS7A-218ENST00000543939 FABP5Q01469 135 aa17.77■□□□□ 0.44
COPS7A-218ENST00000543939 CRTC2Q53ET0 693 aaPredicted RBP17.77■□□□□ 0.44
COPS7A-218ENST00000543939 TTTY10Q9BZA0 68 aa17.77■□□□□ 0.44
COPS7A-218ENST00000543939 DLL3Q9NYJ7 618 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms