RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 INAFM1C9JVW0 142 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 AKAP8O43823 692 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SEC14L2O76054 403 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TSPAN19P0C672 248 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ADORA3P0DMS8 318 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 IFNGR1P15260 489 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 FUT4P22083 530 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 AHCYP23526 432 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 KDELR2P33947 212 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MDH1P40925 334 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 IL1RL1Q01638 556 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 C8orf82Q6P1X6 216 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ERICH5Q6P6B1 374 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TTC33Q6PID6 262 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 LRFN4Q6PJG9 635 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MDP1Q86V88 176 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NKAIN4Q8IVV8 208 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CCDC36Q8IYA8 594 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 POU5F2Q8N7G0 328 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 OR6X1Q8NH79 312 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SLC26A7Q8TE54 656 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MOV10Q9HCE1 1003 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MED4Q9NPJ6 270 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NANSQ9NR45 359 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RIMS3Q9UJD0 308 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 BAG5Q9UL15 447 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CAPN7Q9Y6W3 813 aa11.37□□□□□ -0.59
TNFRSF1A-215ENST00000543359 STAB1Q9NY15 2570 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 IGHV2OR16-5A0A0B4J2B6 119 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF726A6NNF4 738 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 FAM220BPB1ANY3 271 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 C11orf98E9PRG8 122 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 KPNA4O00629 521 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SHOX2O60902 331 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 LY6HO94772 140 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 OR5F1O95221 314 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 IGF2P01344 180 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 HLA-HP01893 362 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CRYAAP02489 173 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PCSK6P29122 969 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ARR3P36575 388 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SERPINF1P36955 418 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 OR1E2P47887 323 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 IDH3GP51553 393 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 EFNA4P52798 201 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NUDT6P53370 316 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 UGT2B15P54855 530 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 BIDP55957 195 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CHRNB3Q05901 458 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PIN1Q13526 163 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RAB35Q15286 201 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 EFNB3Q15768 340 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CYBRD1Q53TN4 286 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PRIMA1Q86XR5 153 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TREML1Q86YW5 311 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SLC15A3Q8IY34 581 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF525Q8N782 197 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PCYOX1LQ8NBM8 494 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NUP37Q8NFH4 326 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 OR4F15Q8NGB8 312 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 NANOS1Q8WY41 292 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PROX1Q92786 737 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RCN3Q96D15 328 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 FBXO17Q96EF6 278 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 C20orf141Q9NUB4 165 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 GID8Q9NWU2 228 aa11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TMEM129A0AVI4 362 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 GPRIN2O60269 458 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SERPINI2O75830 405 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PDE5AO76074 875 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MT-ND1P03886 318 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 IGFBP1P08833 259 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 OR4A8P0C604 315 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 COX4I1P13073 169 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF14P17017 642 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 THBS4P35443 961 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RBM34P42696 430 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 CSNK1A1P48729 337 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 DSCR9P59020 149 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RUNX1T1Q06455 604 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 HIST3H3Q16695 136 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MSMPQ1L6U9 139 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MICU2Q8IYU8 434 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 OR2T12Q8NG77 320 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PFN4Q8NHR9 129 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RP9Q8TA86 221 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 FGFBP3Q8TAT2 258 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 C10orf105Q8TEF2 133 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TMEM255BQ8WV15 326 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 LIPHQ8WWY8 451 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SEPHS2Q99611 448 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RHNO1Q9BSD3 238 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 POLR2J2Q9GZM3 115 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 POLR2J3Q9H1A7 115 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PLK3Q9H4B4 646 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms