RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 AURKBQ96GD4 344 aaPredicted RBP1.33□□□□□ -2.2
KNTC1-213ENST00000542727 TCEANC2Q96MN5 208 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 ZNF641Q96N77 438 aaPredicted RBP1.33□□□□□ -2.2
KNTC1-213ENST00000542727 TSNARE1Q96NA8 513 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 MS4A4EQ96PG1 132 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 FMO2Q99518 471 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 COPS8Q99627 209 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 RIOK1Q9BRS2 568 aaKnown RBP1.33□□□□□ -2.2
KNTC1-213ENST00000542727 RSPO3Q9BXY4 272 aaPredicted RBP1.33□□□□□ -2.2
KNTC1-213ENST00000542727 GABARAPL3Q9BY60 117 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 PPA2Q9H2U2 334 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 LY9Q9HBG7 655 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 MRPL47Q9HD33 250 aaKnown RBP1.33□□□□□ -2.2
KNTC1-213ENST00000542727 ADAP2Q9NPF8 381 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 SMOXQ9NWM0 555 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 EPS15L1Q9UBC2 864 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 CDH9Q9ULB4 789 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 KIAA1257Q9ULG3 409 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 F11RQ9Y624 299 aaKnown RBP1.33□□□□□ -2.2
KNTC1-213ENST00000542727 DENND4AQ7Z401 1863 aa1.33□□□□□ -2.2
KNTC1-213ENST00000542727 TICRRQ7Z2Z1 1910 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 A0A1B0GVL5 298 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 PLAC8L1A1L4L8 177 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 GOLGA8SH3BPF8 625 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ANGPT2O15123 496 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 B4GALT5O43286 388 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ZNF208O43345 1280 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 MGRN1O60291 552 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 MTX2O75431 263 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ERLIN2O94905 339 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 RETP07949 1114 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 RHOXF2BP0C7M4 288 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 TLX1NBP0CAT3 122 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 UBTFL1P0CB47 393 aaPredicted RBP1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ZNF286BP0CG31 522 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 TCN1P20061 433 aaPredicted RBP1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ATP5C1P36542 298 aaKnown RBP1.32□□□□□ -2.2
KNTC1-213ENST00000542727 GYG1P46976 350 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 DUSP3P51452 185 aaPredicted RBP1.32□□□□□ -2.2
KNTC1-213ENST00000542727 RPS21P63220 83 aaKnown RBP1.32□□□□□ -2.2
KNTC1-213ENST00000542727 SCRN3Q0VDG4 424 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 GNMTQ14749 295 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 STK11Q15831 433 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 FILIP1LQ4L180 1135 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 LY6G6FQ5SQ64 297 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 KDM7AQ6ZMT4 941 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 MREGQ8N565 214 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 FAM86B1Q8N7N1 296 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 GMCL1P1Q8NEA9 526 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 OR2G2Q8NGZ5 317 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 OR5W2Q8NH69 310 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 FRZBQ92765 325 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 FGF14Q92915 247 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 EXOSC8Q96B26 276 aaKnown RBP1.32□□□□□ -2.2
KNTC1-213ENST00000542727 HSFY1Q96LI6 401 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 PANX2Q96RD6 677 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 RARRES2Q99969 163 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ZSCAN5AQ9BUG6 496 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 TM9SF3Q9HD45 589 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 CTPS2Q9NRF8 586 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 EXD2Q9NVH0 621 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 XCL2Q9UBD3 114 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 OR12D3Q9UGF7 316 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ZNF222Q9UK12 451 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ADAM28Q9UKQ2 775 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 CLEC4AQ9UMR7 237 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 PACSIN2Q9UNF0 486 aaPredicted RBP1.32□□□□□ -2.2
KNTC1-213ENST00000542727 MRPS7Q9Y2R9 242 aaKnown RBP1.32□□□□□ -2.2
KNTC1-213ENST00000542727 CEMIPQ8WUJ3 1361 aa1.32□□□□□ -2.2
KNTC1-213ENST00000542727 ANKRD12Q6UB98 2062 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 TRAV26-1A0A087WT03 109 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 IGKV1D-13A0A0B4J2D9 117 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 A0A1B0GVI7 797 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 SERPINE3A8MV23 424 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 NDC80O14777 642 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 PPP1R2P9O14990 202 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 OR7A10O76100 309 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 RHOBTB1O94844 696 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 BGLAPP02818 100 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 GAPDHP04406 335 aaKnown RBP1.31□□□□□ -2.2
KNTC1-213ENST00000542727 FABP3P05413 133 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 PTMAP06454 111 aaKnown RBP1.31□□□□□ -2.2
KNTC1-213ENST00000542727 IGKV1-13P0DP09 117 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 NPY1RP25929 384 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 OPRD1P41143 372 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 GRIA1P42261 906 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 GPR6P46095 362 aaPredicted RBP1.31□□□□□ -2.2
KNTC1-213ENST00000542727 CCT3P49368 545 aaKnown RBP1.31□□□□□ -2.2
KNTC1-213ENST00000542727 NCBP2P52298 156 aaKnown RBP eCLIP1.31□□□□□ -2.2
KNTC1-213ENST00000542727 SUB1P53999 127 aaKnown RBP eCLIP1.31□□□□□ -2.2
KNTC1-213ENST00000542727 ENPEPQ07075 957 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 MOBPQ13875 183 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 UBE2SQ16763 222 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 EXOC3L2Q2M3D2 409 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 TTLL9Q3SXZ7 439 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 VAX1Q5SQQ9 334 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 HES5Q5TA89 166 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 NANOGP8Q6NSW7 305 aa1.31□□□□□ -2.2
KNTC1-213ENST00000542727 TRIM40Q6P9F5 258 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms