RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RASGEF1BQ0VAM2 473 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 DCTN2Q13561 401 aaKnown RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 ADIPOQQ15848 244 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 PLPPR5Q32ZL2 321 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 C11orf91Q3C1V1 193 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 GPR107Q5VW38 600 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 C11orf87Q6NUJ2 197 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 CCBE1Q6UXH8 406 aaPredicted RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 CBLL1Q75N03 491 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 NUDT13Q86X67 352 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 CROCCP3Q8IVE0 287 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 CCDC116Q8IYX3 515 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 OR4A15Q8NGL6 344 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 FAM110DQ8TAY7 271 aaPredicted RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 COQ8BQ96D53 544 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 CNRIP1Q96F85 164 aaPredicted RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 SH3YL1Q96HL8 342 aaPredicted RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 VSTM2LQ96N03 204 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 APOL4Q9BPW4 351 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 PSD2Q9BQI7 771 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 TPK1Q9H3S4 243 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 REEP4Q9H6H4 257 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 REEP1Q9H902 201 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 TPT1P8Q9HAU6 139 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 PLGRKTQ9HBL7 147 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 IL1RAPQ9NPH3 570 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 G6PC2Q9NQR9 355 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 SCN3BQ9NY72 215 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 AHSPQ9NZD4 102 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 SH3BP4Q9P0V3 963 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 KIF17Q9P2E2 1029 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 ATP6V1HQ9UI12 483 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 FAF1Q9UNN5 650 aaPredicted RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 TPRKBQ9Y3C4 175 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 HSPE1-MOB4S4R3N1 261 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 A0A1W2PNR3 127 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 A0A1W2PRB8 838 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 RNASET2O00584 256 aaKnown RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 SCN2BO60939 215 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 IFNA14P01570 189 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 IGFBP1P08833 259 aaPredicted RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 PRKACGP22612 351 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 CRHBPP24387 322 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 YAP1P46937 504 aaKnown RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 ALDH9A1P49189 494 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 KRTAP10-3P60369 221 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 RAE1P78406 368 aaKnown RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 IL5RAQ01344 420 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 IL1RL1Q01638 556 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 ZNF763Q0D2J5 394 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 C2orf80Q0P641 193 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 ZP4Q12836 540 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 ZNF155Q12901 538 aaPredicted RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 E2F2Q14209 437 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 TMEM176BQ3YBM2 270 aaPredicted RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 ZNF691Q5VV52 312 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 SLC48A1Q6P1K1 146 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 DHRS4L2Q6PKH6 230 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 PIWIL3Q7Z3Z3 882 aaKnown RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 TMEM179BQ7Z7N9 219 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 SLC30A8Q8IWU4 369 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 CLECL1Q8IZS7 167 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 BCL6BQ8N143 479 aaPredicted RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 GTPBP8Q8N3Z3 284 aaPredicted RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 C11orf65Q8NCR3 313 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 CPNE4Q96A23 557 aaPredicted RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 MTERF3Q96E29 417 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 HSH2DQ96JZ2 352 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 DOK1Q99704 481 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 TBL1XR1Q9BZK7 514 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 RIBC2Q9H4K1 309 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 MED17Q9NVC6 651 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 UTS2RQ9UKP6 389 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 GMEB1Q9Y692 573 aa8.43□□□□□ -1.06
CHFR-220ENST00000541817 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
CHFR-220ENST00000541817 ARHGAP32A7KAX9 2087 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 B9A039 149 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 hCG_2039718K7EN88 272 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 M0QZ24 198 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 SEC14L2O76054 403 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 UTS2O95399 124 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 KRT75O95678 551 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 KNG1P01042 644 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 CCDC159P0C7I6 412 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 SAGP10523 405 aaPredicted RBP8.42□□□□□ -1.06
CHFR-220ENST00000541817 CCNA2P20248 432 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 COL8A2P25067 703 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 FPR2P25090 351 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 SERPINB1P30740 379 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 PIK3CBP42338 1070 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 CLK3P49761 638 aaKnown RBP8.42□□□□□ -1.06
CHFR-220ENST00000541817 PPOXP50336 477 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 HPCAP84074 193 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 PSG6Q00889 435 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 CD47Q08722 323 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 RBBP4Q09028 425 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 C17orf67Q0P5P2 114 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 BAMBIQ13145 260 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 RGNQ15493 299 aa8.42□□□□□ -1.06
CHFR-220ENST00000541817 FAM189A2Q15884 450 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms