RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CDC42EP2O14613 210 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 AHCYL1O43865 530 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 MGRN1O60291 552 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 PTP4A3O75365 173 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 E2F6O75461 281 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 IGHG1P01857 330 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 APEHP13798 732 aaKnown RBP16.56■□□□□ 0.24
VPS33A-205ENST00000541169 HOXB1P14653 301 aaPredicted RBP16.56■□□□□ 0.24
VPS33A-205ENST00000541169 FASP25445 335 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 GSSP48637 474 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 BIDP55957 195 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 LSM11P83369 360 aaKnown RBP eCLIP16.56■□□□□ 0.24
VPS33A-205ENST00000541169 COX10Q12887 443 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 LAPTM4AQ15012 233 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 ZSCAN26Q16670 478 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 GPR139Q6DWJ6 353 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 SMARCD3Q6STE5 483 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 BHLHA15Q7RTS1 189 aaPredicted RBP16.56■□□□□ 0.24
VPS33A-205ENST00000541169 ZER1Q7Z7L7 766 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 C20orf196Q8IYI0 205 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 ZNF433Q8N7K0 673 aaPredicted RBP16.56■□□□□ 0.24
VPS33A-205ENST00000541169 OR6N1Q8NGY5 312 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 DNAJC9Q8WXX5 260 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 UTP4Q969X6 686 aaKnown RBP16.56■□□□□ 0.24
VPS33A-205ENST00000541169 C14orf79Q96F83 325 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 TNFRSF13CQ96RJ3 184 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 GPX7Q96SL4 187 aaPredicted RBP16.56■□□□□ 0.24
VPS33A-205ENST00000541169 DGCR6LQ9BY27 220 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 ACTR6Q9GZN1 396 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 OBP2BQ9NPH6 170 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 TRAV27A0A087WT01 109 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 CIB4A0PJX0 185 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 F13BP05160 661 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 CD14P08571 375 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 IGHV1-2P23083 117 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 SSTR2P30874 369 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 HOXC12P31275 282 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 RPL4P36578 427 aaKnown RBP16.55■□□□□ 0.24
VPS33A-205ENST00000541169 RPL27P61353 136 aaKnown RBP16.55■□□□□ 0.24
VPS33A-205ENST00000541169 CCNIQ14094 377 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 DAZAP2Q15038 168 aaPredicted RBP16.55■□□□□ 0.24
VPS33A-205ENST00000541169 ACKR1Q16570 336 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 TIMM23BQ5SRD1 257 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 ZNF770Q6IQ21 691 aaPredicted RBP16.55■□□□□ 0.24
VPS33A-205ENST00000541169 PGBD2Q6P3X8 592 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 CD300LDQ6UXZ3 194 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 DPY19L2P2Q6ZN68 376 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 CCDC36Q8IYA8 594 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 OR13C2Q8NGS9 318 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 MOSPD2Q8NHP6 518 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 GIPC3Q8TF64 312 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 SLCO4A1Q96BD0 722 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 MUCL1Q96DR8 90 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 MUS81Q96NY9 551 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 MED29Q9NX70 200 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 GRHPRQ9UBQ7 328 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 U3KQV3 271 aa16.55■□□□□ 0.24
VPS33A-205ENST00000541169 IDH3BO43837 385 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 SERPINI2O75830 405 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 IGHV3-9P01782 118 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 ANXA8P13928 327 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 CSNK1A1P48729 337 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 RPS6KA3P51812 740 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 CTXN1P60606 82 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 FHL1Q13642 323 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 ATP6AP1Q15904 470 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 CLDN22Q8N7P3 220 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 LRRC75AQ8NAA5 344 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 MAGEE2Q8TD90 523 aaPredicted RBP16.54■□□□□ 0.24
VPS33A-205ENST00000541169 ASB10Q8WXI3 467 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 TXNDC15Q96J42 360 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 ALG12Q9BV10 488 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 OSBPL10Q9BXB5 764 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 POLDIP3Q9BY77 421 aaKnown RBP16.54■□□□□ 0.24
VPS33A-205ENST00000541169 ZNF556Q9HAH1 456 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 SMURF2Q9HAU4 748 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 GLTPQ9NZD2 209 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 MAGED1Q9Y5V3 778 aaPredicted RBP16.54■□□□□ 0.24
VPS33A-205ENST00000541169 FREM1Q5H8C1 2179 aa16.54■□□□□ 0.24
VPS33A-205ENST00000541169 OR5H1A6NKK0 313 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 XKRYO14609 159 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 IMPA2O14732 288 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 ACADSP16219 412 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 SLC6A6P31641 620 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 CLRN1P58418 232 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 ROR2Q01974 943 aaKnown RBP16.53■□□□□ 0.24
VPS33A-205ENST00000541169 HIST3H3Q16695 136 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 RFX4Q33E94 735 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 NRN1LQ496H8 165 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 ARMC4Q5T2S8 1044 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 ANKRD16Q6P6B7 361 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 ARIH2OSQ8N7S6 290 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 AQP11Q8NBQ7 271 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 OR10G2Q8NGC3 310 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 OR52L1Q8NGH7 329 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 FANK1Q8TC84 345 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 TMEM54Q969K7 222 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 MARVELD3Q96A59 401 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 S100PBPQ96BU1 408 aa16.53■□□□□ 0.24
VPS33A-205ENST00000541169 EMC6Q9BV81 110 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms