RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 Q6ZTK2 550 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 PIWIL3Q7Z3Z3 882 aaKnown RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 BABAM2Q9NXR7 383 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 CD300AQ9UGN4 299 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ZFP92A6NM28 416 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 NRG2O14511 850 aaPredicted RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 SH2D1BO14796 132 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 P2RX6O15547 441 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 TBX10O75333 385 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 NCR1O76036 304 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 GLRA1P23415 457 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 HNRNPA1L2Q32P51 320 aaKnown RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 CLLU1OSQ5K130 101 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 DPPA2Q7Z7J5 298 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 MRPL43Q8N983 215 aaKnown RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 SLC30A3Q99726 388 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 AMBRA1Q9C0C7 1298 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 MED20Q9H944 212 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 HES4Q9HCC6 221 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ASXL3Q9C0F0 2248 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 CPMP14384 443 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ERVPABLB-1P60509 514 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 TATDN3Q17R31 274 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 NXNL2Q5VZ03 156 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 BPIFB2Q8N4F0 458 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ROBO4Q8WZ75 1007 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ST8SIA4Q92187 359 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 C16orf70Q9BSU1 422 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 RTL8AQ9BWD3 113 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 BCL9LQ86UU0 1499 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 C5orf49A4QMS7 147 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 PRAMEF25A6NGN4 478 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 LRRC3CA6NJW4 275 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ILKQ13418 452 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 FGFBP1Q14512 234 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 OR2B11Q5JQS5 317 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 PRAMEF5Q5TYX0 476 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 PRAMEF6Q5VXH4 476 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 SLC6A19Q695T7 634 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ENDOVQ8N8Q3 282 aaKnown RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 OR7G3Q8NG95 312 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 OR5M9Q8NGP3 310 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 KCNE4Q8WWG9 221 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 SLC22A23A1A5C7 686 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 FIGNL2A6NMB9 653 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 KLF11O14901 512 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 ZNF546Q86UE3 836 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SLC35B2Q8TB61 432 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 THAP7Q9BT49 309 aaPredicted RBP9.28□□□□□ -0.92
TRERF1-205ENST00000541110 OR52A5Q9H2C5 316 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 ZNF334Q9HCZ1 680 aaPredicted RBP9.28□□□□□ -0.92
TRERF1-205ENST00000541110 A0A0B4J2A0 478 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 METTL15A6NJ78 407 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SELENOWP63302 87 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 TMEM64Q6YI46 380 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SCML4Q8N228 414 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 HAVCR2Q8TDQ0 301 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 TVP23CQ96ET8 276 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 ZNF331Q9NQX6 463 aaPredicted RBP9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SLC35D1Q9NTN3 355 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SHPKQ9UHJ6 478 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 XKRY2A2RUG3 117 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 EIF1BO60739 113 aaKnown RBP9.28□□□□□ -0.92
TRERF1-205ENST00000541110 NPY1RP25929 384 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 PCGF2P35227 344 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 RHOBP62745 196 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 TEKQ02763 1124 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 DPPA4Q7L190 304 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 TSEN54Q7Z6J9 526 aaKnown RBP9.28□□□□□ -0.92
TRERF1-205ENST00000541110 IGDCC3Q8IVU1 814 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 RSRP1Q9BUV0 290 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 CRLF2Q9HC73 371 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 NECAP2Q9NVZ3 263 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 MRPS28Q9Y2Q9 187 aaKnown RBP9.28□□□□□ -0.92
TRERF1-205ENST00000541110 TNFSF11O14788 317 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 CALCBP10092 127 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SDHBP21912 280 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 RAB15P59190 212 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 METAP1DQ6UB28 335 aaPredicted RBP9.28□□□□□ -0.92
TRERF1-205ENST00000541110 IQCKQ8N0W5 287 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 PIGTQ969N2 578 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SLC12A9Q9BXP2 914 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 MMACHCQ9Y4U1 282 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 C10orf71Q711Q0 1435 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 CYTIPO60759 359 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 HPRP00739 348 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 FGF4P08620 206 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 GIFP27352 417 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SELPLGQ14242 412 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 BTNL3Q6UXE8 466 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 C1orf87Q8N0U7 546 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SARGQ9BW04 601 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 MMP28Q9H239 520 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 MYOGP15173 224 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 MLF1P58340 268 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 PLAURQ03405 335 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 ADIRFQ15847 76 aa9.28□□□□□ -0.92
TRERF1-205ENST00000541110 MEPCEQ7L2J0 689 aaKnown RBP9.28□□□□□ -0.92
TRERF1-205ENST00000541110 SSX7Q7RTT5 188 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms