RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 LALBAP00709 142 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 MRPL3P09001 348 aaKnown RBP11.21□□□□□ -0.61
SMAD3-204ENST00000540846 SPI1P17947 270 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 GABRA5P31644 462 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 DIO1P49895 249 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 ZNF41P51814 821 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-204ENST00000540846 MAP2K6P52564 334 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 ARG2P78540 354 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 DBPQ10586 325 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-204ENST00000540846 KRR1Q13601 381 aaKnown RBP11.21□□□□□ -0.61
SMAD3-204ENST00000540846 PLPPR5Q32ZL2 321 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 LINC00303Q3SY05 128 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 ARSKQ6UWY0 536 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 JAZF1Q86VZ6 243 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 PLCZ1Q86YW0 608 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 SULF2Q8IWU5 870 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 EXD3Q8N9H8 876 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 OR10H4Q8NGA5 316 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 OR5J2Q8NH18 312 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 ZPLD1Q8TCW7 415 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 SPRYD4Q8WW59 207 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-204ENST00000540846 SMPDL3BQ92485 455 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 TSPAN32Q96QS1 320 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 CNN2Q99439 309 aaKnown RBP11.21□□□□□ -0.61
SMAD3-204ENST00000540846 OR11A1Q9GZK7 315 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 NXF2Q9GZY0 626 aaKnown RBP11.21□□□□□ -0.61
SMAD3-204ENST00000540846 PRORYQ9H606 182 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 PLGRKTQ9HBL7 147 aa11.21□□□□□ -0.61
SMAD3-204ENST00000540846 SF3B6Q9Y3B4 125 aaKnown RBP11.21□□□□□ -0.61
SMAD3-204ENST00000540846 SPENQ96T58 3664 aaKnown RBP11.21□□□□□ -0.62
SMAD3-204ENST00000540846 MED12Q93074 2177 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 FTCDNL1E5RQL4 147 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF670-ZNF695F2Z2N8 137 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 TFP02787 698 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 F13BP05160 661 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 RFPL3SP0C7P2 107 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 GRPRP30550 384 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 OPRL1P41146 370 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 CDKN2AP42771 156 aaKnown RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 CAPZA2P47755 286 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 BMXP51813 675 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 PON3Q15166 354 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 MESTQ5EB52 335 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 SLC25A25Q6KCM7 469 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 LEG1Q6P5S2 330 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 CD200R1LQ6Q8B3 271 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 GALNTL5Q7Z4T8 443 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 OR6Q1Q8NGQ2 317 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZMYND19Q96E35 227 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 C1GALT1C1Q96EU7 318 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 TRMT61AQ96FX7 289 aaKnown RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ABHD17AQ96GS6 310 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 GNRHR2Q96P88 292 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 FAM173AQ9BQD7 235 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 SIAEQ9HAT2 523 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 EXOSC4Q9NPD3 245 aaKnown RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ASB6Q9NWX5 421 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 MRPL39Q9NYK5 338 aaKnown RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 TAS2R5Q9NYW4 299 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 GRHPRQ9UBQ7 328 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZMIZ1Q9ULJ6 1067 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 SSR3Q9UNL2 185 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 VDAC3Q9Y277 283 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 KLF13Q9Y2Y9 288 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 PCDHGB7Q9Y5F8 929 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 CORINQ9Y5Q5 1042 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 PRRC2CQ9Y520 2896 aaKnown RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 BSNQ9UPA5 3926 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 MKRN2OSH3BPM6 223 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 GLCEO94923 617 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 GLSO94925 669 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 IGHMP01871 453 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 MT-ND5P03915 603 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 IDUAP35475 653 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 RPS25P62851 125 aaKnown RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF85Q03923 595 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 MFSD13AQ14CX5 517 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF829Q3KNS6 432 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF404Q494X3 552 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF766Q5HY98 468 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 LINC01590Q5TEZ4 76 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 VASNQ6EMK4 673 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 Q6ZS92 163 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 RBMXL3Q8N7X1 1067 aaKnown RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 SCAIQ8N9R8 606 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ZFP62Q8NB50 900 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ATP6V1C2Q8NEY4 427 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 MFSD8Q8NHS3 518 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 MCFD2Q8NI22 146 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 SLC25A36Q96CQ1 311 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 TBX5Q99593 518 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 MMP27Q9H306 513 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 ISG20L2Q9H9L3 353 aaKnown RBP11.2□□□□□ -0.62
SMAD3-204ENST00000540846 AKIP1Q9NQ31 210 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 INIPQ9NRY2 104 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 NOX1Q9Y5S8 564 aa11.2□□□□□ -0.62
SMAD3-204ENST00000540846 A0A1W2PQL4 384 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-204ENST00000540846 PLPP3O14495 311 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms