RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CHI3L1P36222 383 aaPredicted RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 ALDH3B1P43353 468 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 CLNS1AP54105 237 aaKnown RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 CLDN17P56750 224 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 NPRL3Q12980 569 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 STX3Q13277 289 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 GNA13Q14344 377 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 MAD2L1BPQ15013 274 aaPredicted RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 LIN52Q52LA3 116 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 PDLIM3Q53GG5 364 aaPredicted RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 OGFOD2Q6N063 350 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 SERPINA11Q86U17 422 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 PEX5LQ8IYB4 626 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 C20orf196Q8IYI0 205 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 ARHGAP24Q8N264 748 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 CADM2Q8N3J6 435 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 ZNF781Q8N8C0 355 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 ADPRHL1Q8NDY3 354 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 VPS37AQ8NEZ2 397 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 OR52P1PQ8NH57 321 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 SLC35B4Q969S0 331 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 KTI12Q96EK9 354 aaPredicted RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 SLC41A3Q96GZ6 507 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 OXGR1Q96P68 337 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 SORT1Q99523 831 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 TMEM120AQ9BXJ8 343 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 C20orf27Q9GZN8 174 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 MS4A5Q9H3V2 200 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 ZNF385DQ9H6B1 395 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 LPAR2Q9HBW0 351 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 SLC6A13Q9NSD5 602 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 OPN4Q9UHM6 478 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 ZNF443Q9Y2A4 671 aaPredicted RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 IGLV3-9A0A075B6K5 115 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 M0R082 166 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 GYG2O15488 501 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 SEC14L2O76054 403 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 AHSA1O95433 338 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 NR2F1P10589 423 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 ZNF43P17038 809 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 TCN1P20061 433 aaPredicted RBP6.24□□□□□ -1.41
YBX3-209ENST00000540747 S100A3P33764 101 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 UBA52P62987 128 aaKnown RBP6.24□□□□□ -1.41
YBX3-209ENST00000540747 KRT72Q14CN4 511 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 CHI3L2Q15782 390 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 PDCD2Q16342 344 aaPredicted RBP6.24□□□□□ -1.41
YBX3-209ENST00000540747 GSG1Q2KHT4 349 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 REP15Q6BDI9 236 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 SHQ1Q6PI26 577 aaKnown RBP6.24□□□□□ -1.41
YBX3-209ENST00000540747 THSD4Q6ZMP0 1018 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 ZNF584Q8IVC4 421 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 GPR137CQ8N3F9 429 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 TEX29Q8N6K0 151 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 PIK3C3Q8NEB9 887 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 ZNF417Q8TAU3 575 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 SLC38A5Q8WUX1 472 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 DVL3Q92997 716 aaPredicted RBP6.24□□□□□ -1.41
YBX3-209ENST00000540747 TAAR8Q969N4 342 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 LRR1Q96L50 414 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 JMJD8Q96S16 334 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 ZNF587Q96SQ5 575 aaPredicted RBP6.24□□□□□ -1.41
YBX3-209ENST00000540747 MYCBPQ99417 103 aaPredicted RBP6.24□□□□□ -1.41
YBX3-209ENST00000540747 SLC6A7Q99884 636 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 SYT3Q9BQG1 590 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 ZNF416Q9BWM5 594 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 SPATA9Q9BWV2 254 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 SUCNR1Q9BXA5 334 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 DENND2DQ9H6A0 471 aaPredicted RBP6.24□□□□□ -1.41
YBX3-209ENST00000540747 NARFLQ9H6Q4 476 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 ZNF665Q9H7R5 613 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 YY1AP1Q9H869 796 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 C12orf10Q9HB07 376 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 AIG1Q9NVV5 245 aa6.24□□□□□ -1.41
YBX3-209ENST00000540747 MS4A18H0YCH9 400 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 J3QLI3 93 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 AIM2O14862 343 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 PPIHO43447 177 aaKnown RBP6.23□□□□□ -1.41
YBX3-209ENST00000540747 PLPP2O43688 288 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 IGHV2-5P01817 119 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 SERPINE1P05121 402 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 ZCCHC18P0CG32 403 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 T-ENOLP0DO92 83 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 HKR1P10072 659 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 HLA-DOBP13765 273 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 ETFAP13804 333 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 LBPP18428 481 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 CALB2P22676 271 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 HTR2AP28223 471 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 GRPRP30550 384 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 RPS5P46782 204 aaKnown RBP6.23□□□□□ -1.41
YBX3-209ENST00000540747 ANXA11P50995 505 aaKnown RBP6.23□□□□□ -1.41
YBX3-209ENST00000540747 COPZ1P61923 177 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 UFM1P61960 85 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 RPS23P62266 143 aaKnown RBP6.23□□□□□ -1.41
YBX3-209ENST00000540747 HOXC5Q00444 222 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 MYBPC1Q00872 1141 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 MFSD13AQ14CX5 517 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 MS4A18Q3C1V0 323 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 MMEL1Q495T6 779 aa6.23□□□□□ -1.41
YBX3-209ENST00000540747 RPS26P11Q5JNZ5 115 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms