RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 LRRC20Q8TCA0 184 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 SMIM4Q8WVI0 70 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 FCAMRQ8WWV6 532 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 SLC38A3Q99624 504 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 GABRG3Q99928 467 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 NPFFR2Q9Y5X5 522 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 TRAV18A0A075B6X5 111 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 IGHV5-51A0A0C4DH38 117 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 DCDC2BA2VCK2 349 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 CLDN4O14493 209 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 PEX14O75381 377 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 KRT33AO76009 404 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 PITPNAQ00169 270 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 BIKQ13323 160 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 ATXN7L3Q14CW9 347 aaPredicted RBP12.84□□□□□ -0.35
INO80E-203ENST00000540562 C17orf107Q6ZR85 190 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 FAM219AQ8IW50 185 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 ELSPBP1Q96BH3 223 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 S100A16Q96FQ6 103 aaKnown RBP12.84□□□□□ -0.35
INO80E-203ENST00000540562 SCARF2Q96GP6 870 aaPredicted RBP12.84□□□□□ -0.35
INO80E-203ENST00000540562 C14orf105Q9NVL8 296 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 CGGBP1Q9UFW8 167 aaPredicted RBP12.84□□□□□ -0.35
INO80E-203ENST00000540562 CAMK2AQ9UQM7 478 aa12.84□□□□□ -0.35
INO80E-203ENST00000540562 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 M0R233 179 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 ICOSLGO75144 302 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 OR7A10O76100 309 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 PSMB1P20618 241 aaKnown RBP12.83□□□□□ -0.36
INO80E-203ENST00000540562 PTH2RP49190 550 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 P2RX1P51575 399 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 NR0B1P51843 470 aaKnown RBP12.83□□□□□ -0.36
INO80E-203ENST00000540562 RIN1Q13671 783 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 CDONQ4KMG0 1287 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 UBE2NLQ5JXB2 153 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 PXDC1Q5TGL8 231 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 ZNF550Q7Z398 422 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 ADAMTS14Q8WXS8 1223 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 CYYR1Q96J86 154 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
INO80E-203ENST00000540562 GLTPQ9NZD2 209 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 ZNF337Q9Y3M9 751 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 PYCARD-AS1I3L0S3 204 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 SCDO00767 359 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 IGHV4-34P06331 123 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 ARHGDIBP52566 201 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 PSMA6P60900 246 aaKnown RBP12.83□□□□□ -0.36
INO80E-203ENST00000540562 BTG1P62324 171 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 FZD2Q14332 565 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 BEX5Q5H9J7 111 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 LINC01590Q5TEZ4 76 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 ARHGAP40Q5TG30 622 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 ZNF627Q7L945 461 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 TAAR8Q969N4 342 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 NXPE2Q96DL1 559 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 INPP5EQ9NRR6 644 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 RDH8Q9NYR8 311 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 CLEC1BQ9P126 229 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 KLHL9Q9P2J3 617 aa12.83□□□□□ -0.36
INO80E-203ENST00000540562 CDV3Q9UKY7 258 aaKnown RBP12.83□□□□□ -0.36
INO80E-203ENST00000540562 FARSAQ9Y285 508 aaKnown RBP12.83□□□□□ -0.36
INO80E-203ENST00000540562 C7orf66A4D0T2 115 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 LGALS8O00214 317 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 OGG1O15527 345 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 PRAMEF2O60811 474 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 TNFRSF4P43489 277 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 GPR143P51810 404 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 EGR4Q05215 589 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 CBFBQ13951 182 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 MESTQ5EB52 335 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 PWWP2BQ6NUJ5 590 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 ZNF767PQ75MW2 155 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 BTN2A1Q7KYR7 527 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 LINC00346Q8IVM7 164 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 FAM46BQ96A09 425 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 OR2M2Q96R28 347 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 NPAS1Q99742 590 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 CHST6Q9GZX3 395 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 OBP2AQ9NY56 170 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 ABRACLQ9P1F3 81 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 SPEF1Q9Y4P9 236 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 PHF3Q92576 2039 aaKnown RBP12.82□□□□□ -0.36
INO80E-203ENST00000540562 KCNJ13O60928 360 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 MAP3K8P41279 467 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 TAS2R20P59543 309 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 ANGPT1Q15389 498 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 CORO6Q6QEF8 472 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 TMEM184AQ6ZMB5 413 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 ZNF782Q6ZMW2 699 aaPredicted RBP12.82□□□□□ -0.36
INO80E-203ENST00000540562 TSPAN32Q96QS1 320 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 LRRC61Q9BV99 259 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■■□□ 16
INO80E-203ENST00000540562 RANBP3Q9H6Z4 567 aaPredicted RBP12.82□□□□□ -0.36
INO80E-203ENST00000540562 HEXA-AS1Q9H8Q6 139 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 MRPS33Q9Y291 106 aaKnown RBP12.82□□□□□ -0.36
INO80E-203ENST00000540562 M0QYG6 137 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 AIPO00170 330 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 TSPAN4O14817 238 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 SLC16A7O60669 478 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 HIST1H2ABP04908 130 aa12.82□□□□□ -0.36
INO80E-203ENST00000540562 UBL4AP11441 157 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms